DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: NAC domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
GSVIVP00038745001 vt SF
  vt PF
AC194340.3_FGT020 External link ze SF
  ze PF
AC211149.1_FGT010 External link ze SF
  ze PF
AC197067.2_FGT023 External link ze SF
  ze PF
AC201894.3_FGT013 External link ze SF
  ze PF
AC204510.2_FGT003 External link ze SF
  ze PF
LOC_Os11g04360.1|12011.m04634|protein External link os SF
  os PF
jgi|Poptr1_1|583893|eugene3.01550060 External link pt SF
  pt PF
jgi|Sorbi1|5051047|Sb02g021226 External link oj SF
  oj PF
AT1G64100.2 External link at SF
  at PF
AT1G64100.2 External link ad SF
  ad PF
AC205696.1_FGT015 External link ze SF
  ze PF
Gm0161x00105 yg SF
  yg PF
AP006675_16.1 External link jp SF
  jp PF
LOC_Os05g26026.1|12005.m06894|protein External link os SF
  os PF No hits
LOC_Os05g26049.1|12005.m06896|protein External link os SF
  os PF No hits
AC203047.2_FGT003 External link ze SF
  ze PF
LOC_Os05g27749.1|12005.m07063|protein External link os SF
  os PF No hits
LOC_Os05g28129.1|12005.m07100|protein External link os SF
  os PF No hits
AC199765.3_FGT019 External link ze SF
  ze PF
AC187843.3_FGT007 External link ze SF
  ze PF
GSVIVP00016250001 vt SF
  vt PF
AC199317.3_FGT010 External link ze SF
  ze PF
AC201757.2_FGT012 External link ze SF
  ze PF
jgi|Sorbi1|5060532|Sb09g020880 External link oj SF
  oj PF
AT1G60300.1 External link ad SF
  ad PF
AT1G60280.1 External link at SF
  at PF
Gm0161x00103.2 yg SF
  yg PF
AP006123_14.1 External link jp SF
  jp PF
jgi|Sorbi1|5042160|Sb06g022080 External link oj SF
  oj PF No hits
AT1G60380.1 External link at SF
  at PF No hits
AT1G60280.1 External link ad SF
  ad PF
AT1G60300.1 External link at SF
  at PF
AT1G60350.1 External link at SF
  at PF
AT1G60380.1 External link ad SF
  ad PF No hits
AT1G19040.1 External link at SF
  at PF
AT1G60340.1 External link ad SF
  ad PF
AT1G60350.1 External link ad SF
  ad PF
LOC_Os04g42940.1|12004.m09259|protein External link os SF
  os PF No hits
jgi|Sorbi1|5031163|Sb10g007890 External link oj SF
  oj PF
AT1G19040.1 External link ad SF
  ad PF
AT1G60340.1 External link at SF
  at PF
LOC_Os08g44820.3|12008.m26799|protein External link os SF
  os PF
jgi|Poptr1_1|571429|eugene3.00130793 External link pt SF
  pt PF
GSVIVP00000504001 vt SF
  vt PF
evm.TU.supercontig_80.14 r6 SF
  r6 PF No hits
Gm1351x00001 yg SF
  yg PF
AC205554.1_FGT022 External link ze SF
  ze PF
jgi|Poptr1_1|199890|gw1.IX.355.1 External link pt SF
  pt PF
AT4G35580.2 External link ad SF
  ad PF