DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: lambda repressor-like DNA-binding domains.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|190892957|ref|YP_001979499.1| External link 9p SF
  9p PF
gi|76788388|ref|YP_329455.1| External link a9 SF
  a9 PF
gi|146278616|ref|YP_001168775.1| External link 3k SF
  3k PF
gi|28379795|ref|NP_786687.1| External link lb SF
  lb PF
gi|15833949|ref|NP_312722.1| External link eo SF
  eo PF
gi|16804033|ref|NP_465518.1| External link lm SF
  lm PF
gi|171057493|ref|YP_001789842.1| External link 7i SF
  7i PF
gi|82544630|ref|YP_408577.1| External link sq SF
  sq PF
gi|71737940|ref|YP_277270.1| External link qs SF
  qs PF
gi|159045862|ref|YP_001534656.1| External link 6q SF
  6q PF
gi|148544510|ref|YP_001271880.1| External link 49 SF
  49 PF
gi|90020552|ref|YP_526379.1| External link d0 SF
  d0 PF
gi|162420774|ref|YP_001606229.1| External link 6m SF
  6m PF
gi|30260902|ref|NP_843279.1| External link ba SF
  ba PF
gi|94990020|ref|YP_598120.1| External link ts SF
  ts PF
gi|114565141|ref|YP_752655.1| External link 3w SF
  3w PF
gi|170022210|ref|YP_001727164.1| External link 9d SF
  9d PF
gi|116334024|ref|YP_795551.1| External link 52 SF
  52 PF
gi|158312310|ref|YP_001504818.1| External link 6p SF
  6p PF
gi|118443686|ref|YP_877060.1| External link 12 SF
  12 PF
gi|157156677|ref|YP_001465243.1| External link 6l SF
  6l PF
gi|16078451|ref|NP_389270.1| External link bs SF
Gene name: ykvZ  bs PF
gi|28379961|ref|NP_786853.1| External link lb SF
  lb PF
gi|170680451|ref|YP_001746083.1| External link 9t SF
  9t PF
gi|25011776|ref|NP_736171.1| External link s5 SF
  s5 PF
gi|23100696|ref|NP_694163.1| External link oi SF
  oi PF
gi|94310843|ref|YP_584053.1| External link r4 SF
  r4 PF
gi|146321072|ref|YP_001200783.1| External link 2h SF
  2h PF
gi|126461206|ref|YP_001042320.1| External link 21 SF
  21 PF
gi|62317810|ref|YP_223663.1| External link b3 SF
  b3 PF
gi|119026207|ref|YP_910052.1| External link 5g SF
  5g PF
gi|146310290|ref|YP_001175364.1| External link 08 SF
  08 PF
gi|108809548|ref|YP_653464.1| External link ys SF
  ys PF
gi|116493964|ref|YP_805698.1| External link 1o SF
  1o PF
gi|16122699|ref|NP_406012.1| External link yp SF
  yp PF
gi|119947152|ref|YP_944832.1| External link 0x SF
  0x PF
gi|163848281|ref|YP_001636325.1| External link 6w SF
  6w PF
gi|72162111|ref|YP_289768.1| External link tf SF
  tf PF
gi|74312314|ref|YP_310733.1| External link on SF
  on PF
gi|156935932|ref|YP_001439848.1| External link 69 SF
  69 PF
gi|56413601|ref|YP_150676.1| External link x0 SF
  x0 PF
gi|194396759|ref|YP_002038582.1| External link 8z SF
  8z PF
gi|170682803|ref|YP_001744933.1| External link 9t SF
  9t PF
gi|150019819|ref|YP_001312073.1| External link 03 SF
  03 PF
gi|110804142|ref|YP_687662.1| External link 3s SF
  3s PF
gi|22537832|ref|NP_688683.1| External link s4 SF
  s4 PF
gi|123441631|ref|YP_001005616.1| External link 1g SF
  1g PF
gi|21218839|ref|NP_624618.1| External link sf SF
  sf PF
gi|15903855|ref|NP_359405.1| External link st SF
  st PF
gi|50120894|ref|YP_050061.1| External link er SF
  er PF