DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|118473610|ref|YP_889584.1| External link 3e SF
  3e PF
gi|29834052|ref|NP_828686.1| External link s9 SF
  s9 PF
gi|21219269|ref|NP_625048.1| External link sf SF
  sf PF
gi|86157899|ref|YP_464684.1| External link ae SF
  ae PF
gi|74317273|ref|YP_315013.1| External link nt SF
  nt PF
jgi|Batde5|93146|GP3.087050 External link b9 SF
  b9 PF
gi|158319638|ref|YP_001512145.1| External link 68 SF
  68 PF
gi|163840876|ref|YP_001625281.1| External link 7f SF
  7f PF
gi|150019502|ref|YP_001311756.1| External link 03 SF
  03 PF
gi|111222843|ref|YP_713637.1| External link 1b SF
  1b PF
gi|167646560|ref|YP_001684223.1| External link 7o SF
  7o PF
gi|119715608|ref|YP_922573.1| External link 0j SF
  0j PF
gi|15610385|ref|NP_217766.1| External link mb SF
  mb PF
gi|114800265|ref|YP_760218.1| External link 54 SF
  54 PF
gi|16126098|ref|NP_420662.1| External link cc SF
  cc PF
gi|57865728|ref|YP_189842.1| External link ep SF
  ep PF
gi|191636858|ref|YP_001986024.1| External link 95 SF
  95 PF
gi|118468884|ref|YP_886212.1| External link 3e SF
  3e PF
gi|158313624|ref|YP_001506132.1| External link 6p SF
  6p PF
gi|108801802|ref|YP_641999.1| External link yb SF
  yb PF
gi|120406260|ref|YP_956089.1| External link 28 SF
  28 PF
gi|119870954|ref|YP_940906.1| External link 46 SF
  46 PF
gi|120404367|ref|YP_954196.1| External link 28 SF
  28 PF
gi|148663112|ref|YP_001284635.1| External link 4q SF
  4q PF
gi|91781040|ref|YP_556247.1| External link b4 SF
  b4 PF
gi|158312370|ref|YP_001504878.1| External link 6p SF
  6p PF
gi|150019728|ref|YP_001311982.1| External link 03 SF
  03 PF
gi|182435912|ref|YP_001823631.1| External link 7n SF
  7n PF
gi|183981316|ref|YP_001849607.1| External link 8u SF
  8u PF
gi|54022411|ref|YP_116653.1| External link nf SF
  nf PF
gi|114561414|ref|YP_748927.1| External link 3w SF
  3w PF
gi|31794429|ref|NP_856922.1| External link mc SF
  mc PF
gi|145595106|ref|YP_001159403.1| External link 1h SF
  1h PF
gi|134098570|ref|YP_001104231.1| External link 18 SF
  18 PF
gi|145222051|ref|YP_001132729.1| External link 4h SF
  4h PF
gi|121639138|ref|YP_979362.1| External link 07 SF
  07 PF
gi|119716329|ref|YP_923294.1| External link 0j SF
  0j PF
gi|120402745|ref|YP_952574.1| External link 28 SF
  28 PF
gi|15842838|ref|NP_337875.1| External link mu SF
  mu PF
gi|148824451|ref|YP_001289205.1| External link 51 SF
  51 PF
gi|120401793|ref|YP_951622.1| External link 28 SF
  28 PF
gi|148556201|ref|YP_001263783.1| External link 2i SF
  2i PF
gi|116872322|ref|YP_849103.1| External link 2g SF
  2g PF
gi|118465287|ref|YP_880365.1| External link 59 SF
  59 PF
gi|54026215|ref|YP_120457.1| External link nf SF
  nf PF
gi|118618064|ref|YP_906396.1| External link 5o SF
  5o PF