DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: "Winged helix" DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|22537258|ref|NP_688109.1| External link s4 SF
  s4 PF
gi|94988591|ref|YP_596692.1| External link pk SF
  pk PF
gi|71903483|ref|YP_280286.1| External link zy SF
  zy PF
gi|21910315|ref|NP_664583.1| External link s7 SF
  s7 PF
gi|146318723|ref|YP_001198435.1| External link 4r SF
  4r PF
gi|146296243|ref|YP_001180014.1| External link 1q SF
  1q PF
gi|110799884|ref|YP_696976.1| External link 2f SF
  2f PF
gi|57867539|ref|YP_189222.1| External link ep SF
  ep PF
gi|116493208|ref|YP_804943.1| External link 0d SF
  0d PF
gi|182684158|ref|YP_001835905.1| External link 86 SF
  86 PF
gi|54027145|ref|YP_121387.1| External link nf SF
  nf PF
gi|83590472|ref|YP_430481.1| External link m8 SF
  m8 PF
gi|150009176|ref|YP_001303919.1| External link 0g SF
  0g PF
gi|167628814|ref|YP_001679313.1| External link 8j SF
  8j PF
gi|120603111|ref|YP_967511.1| External link 0t SF
  0t PF
gi|116749038|ref|YP_845725.1| External link 0l SF
  0l PF
gi|157363814|ref|YP_001470581.1| External link 5v SF
  5v PF
gi|30260439|ref|NP_842816.1| External link ba SF
  ba PF
gi|152974092|ref|YP_001373609.1| External link 0w SF
  0w PF
gi|15900958|ref|NP_345562.1| External link sr SF
  sr PF
gi|110801673|ref|YP_699563.1| External link 5n SF
  5n PF
gi|94984737|ref|YP_604101.1| External link d4 SF
  d4 PF
gi|154685097|ref|YP_001420258.1| External link 2o SF
  2o PF
gi|148381249|ref|YP_001255790.1| External link 0i SF
  0i PF
gi|118444973|ref|YP_878946.1| External link 12 SF
  12 PF
gi|134103374|ref|YP_001109035.1| External link 18 SF
  18 PF
gi|119714757|ref|YP_921722.1| External link 0j SF
  0j PF
gi|15644178|ref|NP_229227.1| External link tm SF
  tm PF
gi|116333265|ref|YP_794792.1| External link 52 SF
  52 PF
gi|116873509|ref|YP_850290.1| External link 2g SF
  2g PF
gi|157691321|ref|YP_001485783.1| External link 6f SF
  6f PF
gi|82751648|ref|YP_417389.1| External link sk SF
  sk PF
gi|42518550|ref|NP_964480.1| External link lj SF
  lj PF
gi|116494742|ref|YP_806476.1| External link 1o SF
  1o PF
gi|154248923|ref|YP_001409748.1| External link 3l SF
  3l PF
gi|150021094|ref|YP_001306448.1| External link 2y SF
  2y PF
gi|116629074|ref|YP_814246.1| External link 13 SF
  13 PF
gi|163841447|ref|YP_001625852.1| External link 7f SF
  7f PF
gi|170017805|ref|YP_001728724.1| External link 7x SF
  7x PF
gi|94992414|ref|YP_600513.1| External link pp SF
  pp PF
gi|118476010|ref|YP_893161.1| External link 31 SF
  31 PF
gi|172058790|ref|YP_001815250.1| External link 7r SF
  7r PF
gi|90962189|ref|YP_536105.1| External link lv SF
  lv PF
gi|167630786|ref|YP_001681285.1| External link 8j SF
  8j PF
gi|70725987|ref|YP_252901.1| External link zh SF
  zh PF
gi|47525523|ref|YP_016872.1| External link b2 SF
  b2 PF
gi|184154800|ref|YP_001843140.1| External link 9b SF
  9b PF
gi|28377588|ref|NP_784480.1| External link lb SF
  lb PF
gi|148658192|ref|YP_001278397.1| External link 4a SF
  4a PF
gi|15805963|ref|NP_294663.1| External link dr SF
  dr PF