DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Zn2/Cys6 DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
AN0642.2 an SF
  an PF
e_gw1_1.1110 a5 SF
  a5 PF
AFL2G_07862 gq SF
  gq PF
HCAG_04458.1 hk SF
  hk PF
CPAG_03869 ik SF
  ik PF
UM04099.1 um SF
  um PF
BC1G_14505 b7 SF
  b7 PF
jgi|CocheC5_1|26662|estExt_fgenesh1_pg.C_10092 External link wc SF
  wc PF
jgi|Trive1|42822|e_gw1.11.375.1 External link nj SF
  nj PF
FGSG_05925 fg SF
  fg PF No hits
jgi|Triat1|30069|e_gw1.1.3293.1 External link wt SF
  wt PF
Afu6g09870 External link ao SF
  ao PF
FGSG_02554 fg SF
  fg PF No hits
(NCU05383.2) External link ns SF
  ns PF
AFL2G_09813 gq SF
  gq PF
jgi|Necha2|85112|fgenesh1_pg.sca_6_chr9_2_0000575 External link nx SF
  nx PF
FVEG_11861 fv SF
  fv PF
jgi|Triat1|30559|e_gw1.1.3429.1 External link wt SF
  wt PF
44869 re SF
  re PF
34318 re SF
  re PF
FVEG_04507 fv SF
  fv PF
FOXG_07573 fo SF
  fo PF
44237 re SF
  re PF
jgi|Triat1|53228|e_gw1.17.53.1 External link wt SF
  wt PF
jgi|Phybl1|65418|fgeneshPB_pg.12__51 External link hn SF
  hn PF
jgi|Emihu1|253934|gm1.197900001 External link ex SF
  ex PF
AO090012000002 a8 SF
  a8 PF
AN1820.2 an SF
  an PF
RO3G_04343.1 ry SF
  ry PF
jgi|Pospl1|92178|fgenesh3_pg.184__12 External link ia SF
  ia PF
jgi|Picst3|31032|fgenesh1_pg.C_chr_3.1000619 External link ip SF
  ip PF
jgi|CocheC5_1|110178|estExt_Genewise1Plus.C_160442 External link wc SF
  wc PF
34193 re SF
  re PF
(NCU08848.2) External link ns SF
  ns PF
Pa_0_930 nq SF
  nq PF
PGTG_19721 p4 SF
  p4 PF
jgi|Trive1|47789|e_gw1.18.19.1 External link nj SF
  nj PF
jgi|Trive1|35687|e_gw1.5.532.1 External link nj SF
  nj PF
jgi|Necha2|45494|e_gw1.9.472.1 External link nx SF
  nx PF
(SNU14845.1) nd SF
  nd PF
Pa_3_9830 nq SF
  nq PF
FGSG_08038 fg SF
  fg PF No hits
jgi|Necha2|83430|fgenesh1_pg.sca_17_chr8_1_0000203 External link nx SF
  nx PF
jgi|Triat1|35225|e_gw1.2.808.1 External link wt SF
  wt PF
ATEG_02805 gi SF
  gi PF
CLUG_05613 iu SF
  iu PF
AN4334.2 an SF
  an PF
jgi|Lacbi1|309166|eu2.Lbscf0003g08050 External link lo SF
  lo PF
jgi|Triat1|135028|estExt_Genewise1.C_11876 External link wt SF
  wt PF
jgi|Sporo1|33644|estExt_fgenesh1_pg.C_90122 External link yu SF
  yu PF