DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: lambda repressor-like DNA-binding domains.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|161523044|ref|YP_001585973.1| External link 76 SF
  76 PF
gi|167033198|ref|YP_001668429.1| External link 7g SF
  7g PF
gi|104781385|ref|YP_607883.1| External link pq SF
  pq PF
gi|73539657|ref|YP_300024.1| External link rl SF
  rl PF
gi|116696064|ref|YP_841640.1| External link 2j SF
  2j PF
gi|159898379|ref|YP_001544626.1| External link 5u SF
  5u PF
gi|99081523|ref|YP_613677.1| External link ic SF
  ic PF
gi|50121363|ref|YP_050530.1| External link er SF
  er PF
gi|160875227|ref|YP_001554543.1| External link 7a SF
  7a PF
gi|66046048|ref|YP_235889.1| External link ud SF
  ud PF
gi|158334468|ref|YP_001515640.1| External link 81 SF
  81 PF
gi|152985545|ref|YP_001349953.1| External link 4j SF
  4j PF
gi|15595808|ref|NP_249302.1| External link pa SF
  pa PF
gi|184157525|ref|YP_001845864.1| External link 99 SF
  99 PF
gi|85058915|ref|YP_454617.1| External link og SF
  og PF
ENSAPMP00000027990 External link aj SF
  aj PF
jgi|Poptr1_1|792127|fgenesh4_pg.C_scaffold_3345000001 External link pt SF
  pt PF
gi|152978883|ref|YP_001344512.1| External link 4k SF
  4k PF
gi|146328782|ref|YP_001209185.1| External link 3i SF
  3i PF
gi|78357023|ref|YP_388472.1| External link ds SF
  ds PF
gi|148545826|ref|YP_001265928.1| External link 0a SF
  0a PF No hits
gi|169633856|ref|YP_001707592.1| External link 7l SF
  7l PF
gi|160897372|ref|YP_001562954.1| External link 7d SF
  7d PF
gi|117618127|ref|YP_856555.1| External link 33 SF
  33 PF
gi|167031598|ref|YP_001666829.1| External link 7g SF
  7g PF No hits
ENSAPMP00000020191 External link ai SF
  ai PF
gi|33600663|ref|NP_888223.1| External link bo SF
  bo PF
gi|46580084|ref|YP_010892.1| External link dv SF
  dv PF
gi|71065042|ref|YP_263769.1| External link ri SF
  ri PF
gi|156933786|ref|YP_001437702.1| External link 69 SF
  69 PF
gi|26990601|ref|NP_746026.1| External link ps SF
  ps PF
gi|148827552|ref|YP_001292305.1| External link 4p SF
  4p PF
gi|116048830|ref|YP_792370.1| External link 2t SF
  2t PF
gi|193211773|ref|YP_001997726.1| External link ev SF
  ev PF No hits
gi|170720494|ref|YP_001748182.1| External link 8v SF
  8v PF
gi|187733300|ref|YP_001879888.1| External link ez SF
  ez PF
gi|153001771|ref|YP_001367452.1| External link 1a SF
  1a PF
gi|156933191|ref|YP_001437107.1| External link 69 SF
  69 PF
jgi|Capca1|203754|fgenesh1_pg.C_scaffold_1185000007 External link i1 SF
  i1 PF
gi|15837298|ref|NP_297986.1| External link xf SF
  xf PF
gi|15839101|ref|NP_299789.1| External link xf SF
  xf PF
gi|148358333|ref|YP_001249540.1| External link 2w SF
  2w PF
gi|37526812|ref|NP_930156.1| External link pd SF
  pd PF
gi|120610433|ref|YP_970111.1| External link 4t SF
  4t PF
ENSAPMP00000027492 External link ai SF
  ai PF
gi|110633546|ref|YP_673754.1| External link 0p SF
  0p PF
gi|170719775|ref|YP_001747463.1| External link 8v SF
  8v PF No hits
gi|110641328|ref|YP_669058.1| External link 0m SF
  0m PF
gi|152989242|ref|YP_001346150.1| External link 4j SF
  4j PF
ENSAPMP00000020191 External link aj SF
  aj PF