DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: C2H2 and C2HC zinc fingers.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Nemve1|113856|e_gw.120.9.1 External link nw SF
  nw PF
ENSCSAVP00000001198 External link i0 SF
  i0 PF
ENSCSAVP00000001198 External link c0 SF
  c0 PF
ENSCSAVP00000011297 External link c0 SF
  c0 PF
ENSCSAVP00000001200 External link c0 SF
  c0 PF
ENSCSAVP00000011297 External link i0 SF
  i0 PF
ENSCSAVP00000000511 External link i0 SF
  i0 PF
ENSCSAVP00000000511 External link c0 SF
  c0 PF
ENSCSAVP00000003099 External link c0 SF
  c0 PF
jgi|Brafl1|80515|fgenesh2_pg.scaffold_94000045 External link bf SF
  bf PF
ENSCSAVP00000007531 External link c0 SF
  c0 PF
jgi|Brafl1|79416|fgenesh2_pg.scaffold_84000106 External link bf SF
  bf PF
ENSCSAVP00000011298 External link c0 SF
  c0 PF
ENSGACP00000018984 External link g1 SF
  g1 PF
ENSGACP00000018984 External link gc SF
  gc PF
ENSCSAVP00000003342 External link c0 SF
  c0 PF
jgi|Brafl1|61483|fgenesh2_pm.scaffold_366000003 External link bf SF
  bf PF
ENSCSAVP00000001201 External link c0 SF
  c0 PF
ENSCSAVP00000003335 External link c0 SF
  c0 PF
ENSCSAVP00000000512 External link c0 SF
  c0 PF
jgi|Capca1|146962|e_gw1.724.59.1 External link i1 SF
  i1 PF
ENSCSAVP00000001147 External link c0 SF
  c0 PF
ENSCSAVP00000003341 External link c0 SF
  c0 PF
ENSCSAVP00000003337 External link c0 SF
  c0 PF
ENSCSAVP00000003335 External link i0 SF
  i0 PF
ENSCSAVP00000000515 External link c0 SF
  c0 PF
ENSCSAVP00000003340 External link c0 SF
  c0 PF
jgi|Capca1|173460|estExt_Genewise1Plus.C_990038 External link i1 SF
  i1 PF
ENSORLP00000000684 External link ol SF
  ol PF
jgi|Lotgi1|194528|estExt_Genewise1.C_sca_600166 External link gy SF
  gy PF
ENSORLP00000000684 External link o1 SF
  o1 PF
ENSMODP00000037453 External link op SF
  op PF
jgi|Brafl1|115656|estExt_fgenesh2_pm.C_2850002 External link bf SF
  bf PF
ENSCSAVP00000000516 External link c0 SF
  c0 PF
ENSCSAVP00000000514 External link c0 SF
  c0 PF
ENSCSAVP00000000517 External link c0 SF
  c0 PF
jgi|Brafl1|109280|fgenesh2_pg.scaffold_677000005 External link bf SF
  bf PF
ENSCSAVP00000010427 External link c0 SF
  c0 PF
jgi|Brafl1|71739|fgenesh2_pg.scaffold_34000220 External link bf SF
  bf PF
ENSMICP00000011830 External link io SF
  io PF
ENSCINP00000001930 External link is SF
  is PF
ENSMICP00000011830 External link i2 SF
  i2 PF
jgi|Brafl1|279229|estExt_gwp.C_620135 External link bf SF
  bf PF
ENSCSAVP00000000513 External link c0 SF
  c0 PF
jgi|Brafl1|100834|fgenesh2_pg.scaffold_369000029 External link bf SF
  bf PF
ENSECAP00000016617 External link eq SF
  eq PF
ENSCSAVP00000016922 External link c0 SF
  c0 PF
ENSCSAVP00000001203 External link c0 SF
  c0 PF
jgi|Brafl1|120820|estExt_fgenesh2_pg.C_530079 External link bf SF
  bf PF
scaffold_76.32 External link nk SF
  nk PF