DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: C2H2 and C2HC zinc fingers.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|47507273|gb|AAH71051| External link xl SF
  xl PF
ENSXETP00000052216 External link xn SF
  xn PF
gi|148235507|ref|NP_001084374| External link xl SF
  xl PF
gi|148223786|ref|NP_001084373| External link xl SF
  xl PF
ENSXETP00000052216 External link xk SF
  xk PF
gi|940879|gb|CAA59354| External link xl SF
  xl PF
ENSXETP00000052222 External link xn SF
  xn PF
gi|115934960|ref|XP_001191359.1| External link tu SF
  tu PF
scaffold_180.44 External link nk SF
  nk PF
gi|115620363|ref|XP_783842.2| External link tu SF
  tu PF
ENSP00000262238 External link hs SF
Gene name: YY1  hs PF
ENSMMUP00000032579 External link ru SF
  ru PF
gi|455608|gb|CAA54777| External link xl SF
  xl PF
ENSRNOP00000005743 External link rn SF
  rn PF
ENSMMUP00000014588 External link r2 SF
  r2 PF
ENSPTRP00000011073 External link xq SF
  xq PF
ENSGACP00000011347 External link gc SF
  gc PF
ENSGALP00000036745 External link gh SF
  gh PF
ENSTRUP00000031844 External link to SF
  to PF
ENSOANP00000009110 External link oh SF
  oh PF
ENSPPYP00000006795 External link of SF
  of PF
ENSMMUP00000014588 External link ru SF
  ru PF
ENSORLP00000011842 External link ol SF
  ol PF
ENSORLP00000011842 External link o1 SF
  o1 PF
ENSAPMP00000027211 External link ai SF
  ai PF
ENSGACP00000011347 External link g1 SF
  g1 PF
ENSORLP00000019578 External link ol SF
  ol PF
ENSDARP00000035545 External link da SF
  da PF
ENSTRUP00000031845 External link to SF
  to PF
ENSAPMP00000007810 External link ai SF
  ai PF
ENSCSAVP00000005240 External link c0 SF
  c0 PF
ENSECAP00000004101 External link eq SF
  eq PF
ENSPTRP00000011451 External link xp SF
  xp PF
GLEAN_15577 External link tj SF
  tj PF
ENSOCUP00000014163 External link o3 SF
  o3 PF
ENSBTAP00000027744 External link bw SF
  bw PF
ENSAPMP00000027211 External link aj SF
  aj PF
jgi|Triad1|26536|e_gw1.6.456.1 External link rq SF
  rq PF
ENSGALP00000028022 External link gg SF
  gg PF
ENSAPMP00000009741 External link ai SF
  ai PF
ENSOCUP00000014163 External link ok SF
  ok PF
ENSMMUP00000032579 External link r2 SF
  r2 PF
ENSP00000334170 External link hs SF
Gene name: ZNF410  hs PF
ENSGALP00000036745 External link gg SF
  gg PF
ENSAPMP00000033874 External link ai SF
  ai PF
gi|72111464|ref|XP_790188.1| External link tu SF
  tu PF
jgi|Nemve1|118750|e_gw.156.100.1 External link nw SF
  nw PF
ENSDARP00000030733 External link df SF
  df PF
ENSMUSP00000021692 External link mm SF
  mm PF
ENSOGAP00000013773 External link ob SF
  ob PF