DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Zn2/Cys6 DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|CocheC5_1|26662|estExt_fgenesh1_pg.C_10092 External link wc SF
  wc PF
jgi|Sporo1|33644|estExt_fgenesh1_pg.C_90122 External link yu SF
  yu PF
jgi|Pospl1|113058|estExt_Genewise1Plus.C_720039 External link ia SF
  ia PF
DDB0217526 External link dt SF
  dt PF No hits
CTRG_03956.3 t3 SF
  t3 PF
PGUG_05756.1 ng SF
  ng PF
YPL133C External link xs SF
Gene name: RDS2  xs PF
UREG_06887.1 ur SF
  ur PF
gnl|GLV|KLLA0D09977g kl SF
  kl PF
ORFP:22406 y8 SF
  y8 PF
CTRG_04360.3 t3 SF
  t3 PF
PGUG_04329.1 ng SF
  ng PF
A6ZWB9|A6ZWB9_YEAS7 External link yj SF
  yj PF
CIHG_10011 i3 SF
  i3 PF No hits
FVEG_13323 fv SF
  fv PF No hits
PGUG_03337.1 ng SF
  ng PF
CHG09110.1 hg SF
  hg PF
YPL133C External link sc SF
Gene name: RDS2  sc PF
177.m03223 External link cf SF
  cf PF
CPSG_04867 i7 SF
  i7 PF
jgi|Lacbi1|167431|gwh1.41.127.1 External link lo SF
  lo PF
jgi|Mycgr1|74204|estExt_gwp_gw1.C_31188 External link yo SF
  yo PF No hits
jgi|Pospl1|109587|estExt_Genewise1Plus.C_820043 External link ia SF
  ia PF
CPAG_04097 ik SF
  ik PF
PGUG_04098.1 ng SF
  ng PF
CAWG_01876 iw SF
  iw PF
jgi|Pospl1|96343|fgenesh3_pg.154__25 External link ia SF
  ia PF
jgi|Batde5|25928|fgenesh1_pg.C_scaffold_8000260 External link b9 SF
  b9 PF
LELG_03818 ly SF
  ly PF
164.m01533 External link cf SF
  cf PF
UM04999.1 um SF
  um PF
CA5678|IPF1292 External link al SF
  al PF
CAWG_00699 iw SF
  iw PF
CIMG_05220 im SF
  im PF
RO3G_04517.1 ry SF
  ry PF
jgi|CocheC5_1|98111|estExt_Genewise1Plus.C_11521 External link wc SF
  wc PF
CPAG_07007 i6 SF
  i6 PF
CISG_03277 i5 SF
  i5 PF No hits
jgi|Phybl1|69905|fgeneshPB_pg.30__104 External link hn SF
  hn PF
jgi|Pospl1|103701|fgenesh3_pg.101__12 External link ia SF
  ia PF
jgi|Picst3|62201|e_gww1.6.1.324.1 External link ip SF
  ip PF
jgi|Pospl1|92468|fgenesh3_pg.105__10 External link ia SF
  ia PF
sgtc|cn10027 n1 SF
  n1 PF
CPAG_05404 ik SF
  ik PF
gnl|GLV|KLLA0D07029g kl SF
  kl PF
UM03925.1 um SF
  um PF
PGTG_09439 p4 SF
  p4 PF No hits
jgi|Phybl1|77693|estExt_fgeneshPB_pg.C_90126 External link hn SF
  hn PF
LELG_03276 ly SF
  ly PF
jgi|Picst3|84956|estExt_gwp_genewisePlus_worm.C_chr_6.11579 External link ip SF
  ip PF