DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Emihu1|450965|estExtDG_Genemark1.C_350225 External link ex SF
  ex PF
jgi|Brafl1|125331|estExt_fgenesh2_pg.C_1780033 External link bf SF
  bf PF
ENSSTOP00000004483 External link gb SF
  gb PF
ENSGACP00000014357 External link gc SF
  gc PF
FBpp0080712 External link de SF
  de PF
ENSOPRP00000008933 External link ow SF
  ow PF
ENSTRUP00000026186 External link tq SF
  tq PF
ENSMUSP00000031591 External link mh SF
Gene name: Lhx5  mh PF
ENSRNOP00000025047 External link rn SF
  rn PF
ENSOGAP00000001035 External link o4 SF
  o4 PF
ENSECAP00000000187 External link e5 SF
  e5 PF
ENSPPYP00000000517 External link of SF
  of PF
ENSGALP00000002660 External link gh SF
  gh PF
ENSPTRP00000002905 External link xp SF
  xp PF
gi|64830|gb|CAA45353| External link xl SF
  xl PF
ENSPPYP00000022165 External link o5 SF
  o5 PF
ENSGALP00000035074 External link gg SF
  gg PF
ENSP00000254457 External link hs SF
Gene name: LHX1  hs PF
ENSPTRP00000009320 External link xp SF
  xp PF
ENSEEUP00000013259 External link ek SF
  ek PF
AAEL007120-PA External link ax SF
  ax PF
ENSOGAP00000001035 External link ob SF
  ob PF
ENSPTRP00000048677 External link xp SF
  xp PF
ENSTRUP00000026186 External link to SF
  to PF
ENSPTRP00000009320 External link xq SF
  xq PF
gi|1708831|sp|P37137| External link xl SF
  xl PF
jgi|Lotgi1|109201|e_gw1.10.259.1 External link gy SF
  gy PF
ENSMUSP00000031591 External link mm SF
Gene name: Lhx5  mm PF
jgi|Capca1|228137|estExt_fgenesh1_pg.C_290037 External link i1 SF
  i1 PF
ENSMMUP00000002106 External link r2 SF
  r2 PF
gi|147902022|ref|NP_001084038| External link xl SF
  xl PF
ENSMICP00000015987 External link io SF
  io PF
ENSCAFP00000013426 External link di SF
  di PF
AAEL010744-PA External link ax SF
  ax PF
ENSMODP00000029363 External link op SF
  op PF
ENSPPYP00000005694 External link o5 SF
  o5 PF
ENSTRUP00000000359 External link to SF
  to PF
FBpp0080713 External link dd SF
  dd PF
ENSMMUP00000015805 External link r2 SF
  r2 PF
ENSOGAP00000014383 External link o4 SF
  o4 PF
ENSMODP00000015014 External link oo SF
  oo PF
AAEL007120-PA External link a4 SF
  a4 PF
ENSORLP00000008409 External link ol SF
  ol PF
ENSORLP00000012406 External link ol SF
  ol PF
FBpp0288015 External link do SF
  do PF
ENSEEUP00000013259 External link e4 SF
  e4 PF
ENSMUSP00000056822 External link mm SF
  mm PF
ENSTRUP00000000359 External link tq SF
  tq PF
ENSMODP00000029363 External link oo SF
  oo PF
FBpp0080712 External link dd SF
  dd PF