DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Homeodomain-like.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
gi|13476539|ref|NP_108109.1| External link mk SF
  mk PF
gi|111221025|ref|YP_711819.1| External link 1b SF
  1b PF
gi|134101316|ref|YP_001106977.1| External link 18 SF
  18 PF
gi|169631397|ref|YP_001705046.1| External link 8c SF
  8c PF
gi|158315350|ref|YP_001507858.1| External link 6p SF
  6p PF
gi|158315358|ref|YP_001507866.1| External link 6p SF
  6p PF
gi|29826832|ref|NP_821466.1| External link s9 SF
  s9 PF
gi|27381254|ref|NP_772783.1| External link bj SF
  bj PF
gi|29828253|ref|NP_822887.1| External link s9 SF
  s9 PF
gi|148253168|ref|YP_001237753.1| External link 42 SF
  42 PF
gi|145594276|ref|YP_001158573.1| External link 1h SF
  1h PF
gi|158335033|ref|YP_001516205.1| External link 81 SF
  81 PF
gi|183982663|ref|YP_001850954.1| External link 8u SF
  8u PF
gi|154251746|ref|YP_001412570.1| External link 1e SF
  1e PF
gi|145225296|ref|YP_001135974.1| External link 4h SF
  4h PF
gi|118471641|ref|YP_889234.1| External link 3e SF
  3e PF
gi|21226073|ref|NP_631852.1| External link sf SF
  sf PF
gi|50954470|ref|YP_061758.1| External link lx SF
  lx PF
gi|86739655|ref|YP_480055.1| External link fk SF
  fk PF
gi|111222639|ref|YP_713433.1| External link 1b SF
  1b PF