DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Helix-loop-helix DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Selmo1|411158|fgenesh2_pg.C_scaffold_14000211 External link gj SF
  gj PF
AT1G12860.1 External link at SF
  at PF
AT1G12860.1 External link ad SF
  ad PF
ENSGACP00000024394 External link g1 SF
  g1 PF
ENSTRUP00000023438 External link to SF
  to PF
ENSTRUP00000023440 External link to SF
  to PF
ENSORLP00000009366 External link ol SF
  ol PF
ENSTRUP00000023439 External link tq SF
  tq PF
ENSGACP00000024394 External link gc SF
  gc PF
ENSTRUP00000023439 External link to SF
  to PF
ENSORLP00000009366 External link o1 SF
  o1 PF
jgi|Brafl1|132230|estExt_fgenesh2_pg.C_6580007 External link bf SF
  bf PF
29739.m003684 External link rk SF
  rk PF
scaffold_39.9 External link nk SF
  nk PF
AAEL010031-PA External link a4 SF
  a4 PF
AAEL010031-PA External link ax SF
  ax PF
29042.m003527 hz SF
  hz PF
jgi|Brafl1|129955|estExt_fgenesh2_pg.C_4010001 External link bf SF
  bf PF
415.m00042 External link en SF
  en PF
evm.TU.supercontig_537.2 r6 SF
  r6 PF
ENSDNOP00000002959 External link d6 SF
  d6 PF
F38A6.3d External link ce SF
Gene name: CE32020  ce PF
F38A6.3a External link cl SF
Gene name: CE18671  cl PF
F38A6.3e External link ce SF
  ce PF
F38A6.3b External link ce SF
Gene name: CE18672  ce PF
ENSDARP00000065406 External link da SF
  da PF
ENSDARP00000065406 External link df SF
  df PF
ENSTRUP00000013585 External link to SF
  to PF
AGAP006022-PA External link ah SF
  ah PF
jgi|Triad1|62354|fgeneshTA2_pg.C_scaffold_42000010 External link rq SF
  rq PF
AGAP006022-PA External link ag SF
  ag PF
F38A6.3b External link cz SF
Gene name: CE18672  cz PF
FBpp0225201 External link du SF
  du PF
F38A6.3d External link cl SF
Gene name: CE32020  cl PF
F38A6.3a External link ce SF
Gene name: CE18671  ce PF
F38A6.3b External link cn SF
Gene name: CE18672  cn PF
ENSDNOP00000002959 External link d5 SF
  d5 PF
F38A6.3b External link cl SF
Gene name: CE18672  cl PF
ENSDARP00000091486 External link da SF
  da PF
F38A6.3e External link cl SF
  cl PF
FBpp0245342 External link gw SF
  gw PF
FBpp0112206 External link de SF
  de PF
C41G7.5a External link cn SF
  cn PF
FBpp0112205 External link dm SF
  dm PF
FBpp0112206 External link dm SF
  dm PF
FBpp0084343 External link dm SF
  dm PF
C41G7.5a External link cl SF
  cl PF
CG32474-PA External link dn SF
Gene name: CG32474  dn PF
AAEL008129-PA External link ax SF
  ax PF
FBpp0112206 External link dd SF
  dd PF