DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Zinc finger, C2H2 type.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|MicpuN2|64506|EuGene.1500010227 External link ij SF
  ij PF
Translation:9972 ie SF
  ie PF
GSPATP00014856001 External link ir SF
  ir PF
GSPATP00038123001 External link ir SF
  ir PF
ENSPTRP00000028170 External link xq SF
  xq PF
ENSP00000264808 External link ht SF
Gene name: PRDM5  ht PF
ENSMUSP00000031976 External link mh SF
Gene name: Prdm5  mh PF
ENSMUSP00000031976 External link mm SF
Gene name: Prdm5  mm PF
ENSPPYP00000016789 External link o5 SF
  o5 PF
ENSPTRP00000028170 External link xp SF
  xp PF
ENSPPYP00000016789 External link of SF
  of PF
ENSP00000264808 External link hs SF
Gene name: PRDM5  hs PF
ENSRNOP00000009569 External link ro SF
  ro PF
jgi|Nemve1|113856|e_gw.120.9.1 External link nw SF
  nw PF
ENSRNOP00000009569 External link rn SF
  rn PF
ENSSARP00000000218 External link xr SF
  xr PF
ENSOANP00000023793 External link oh SF
  oh PF
ENSSARP00000000218 External link xb SF
  xb PF
ENSOANP00000023793 External link o2 SF
  o2 PF
ENSDARP00000027279 External link da SF
  da PF
ENSDARP00000027279 External link df SF
  df PF
ENSTRUP00000000947 External link tq SF
  tq PF
ENSTBEP00000003557 External link t2 SF
  t2 PF
ENSSTOP00000014774 External link gb SF
  gb PF
ENSGALP00000024778 External link gh SF
  gh PF
jgi|Brafl1|240852|e_gw.386.8.1 External link bf SF
  bf PF
gi|47551113|ref|NP_999739.1| External link tu SF
  tu PF
jgi|Brafl1|224915|e_gw.104.41.1 External link bf SF
  bf PF
ENSTRUP00000019511 External link tq SF
  tq PF
ENSTRUP00000019508 External link to SF
  to PF
ENSXETP00000018988 External link xk SF
  xk PF
ENSMLUP00000012812 External link lu SF
  lu PF
ENSTBEP00000003557 External link tz SF
  tz PF
ENSTRUP00000019512 External link to SF
  to PF
gi|37805351|gb|AAH60348| External link xl SF
  xl PF
ENSGALP00000024778 External link gg SF
  gg PF
jgi|Nemve1|96522|e_gw.43.248.1 External link nw SF
  nw PF
gi|28277232|gb|AAH44261| External link xl SF
  xl PF
ENSDNOP00000014748 External link d6 SF
  d6 PF
jgi|Nemve1|61034|gw.22.245.1 External link nw SF
  nw PF
ENSTRUP00000000947 External link to SF
  to PF
ENSGACP00000012338 External link gc SF
  gc PF
ENSMODP00000022480 External link oo SF
  oo PF
ENSORLP00000016227 External link o1 SF
  o1 PF
ENSMLUP00000012812 External link l2 SF
  l2 PF
ENSTRUP00000019510 External link to SF
  to PF
ENSSARP00000003687 External link xb SF
  xb PF
ENSDARP00000004889 External link df SF
  df PF
gi|6449048|gb|AAF08791| External link xl SF
  xl PF
ENSETEP00000015977 External link ee SF
  ee PF