DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Bacterial regulatory proteins, luxR family.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|16554500|ref|NP_444224.1| External link hb SF
  hb PF
gi|169236299|ref|YP_001689499.1| External link 8m SF
  8m PF
gi|70727474|ref|YP_254390.1| External link zh SF
  zh PF
gi|194246789|ref|YP_002004428.1| External link 9y SF
  9y PF
29175.m000097 External link rk SF
  rk PF
gi|15601642|ref|NP_233273.1| External link vc SF
  vc PF
gi|13474964|ref|NP_106527.1| External link mk SF
  mk PF
gi|126457742|ref|YP_001074487.1| External link 20 SF
  20 PF
gi|51596821|ref|YP_071012.1| External link yr SF
  yr PF
gi|159045392|ref|YP_001534186.1| External link 6q SF
  6q PF
gi|126451641|ref|YP_001066980.1| External link 20 SF
  20 PF
gi|150397799|ref|YP_001328266.1| External link 2m SF
  2m PF
gi|186895898|ref|YP_001873010.1| External link 9g SF
  9g PF
gi|121600864|ref|YP_993677.1| External link 1m SF
  1m PF
gi|188534209|ref|YP_001908006.1| External link ej SF
  ej PF
gi|53717160|ref|YP_105961.1| External link bi SF
  bi PF
gi|86359580|ref|YP_471472.1| External link rz SF
  rz PF
gi|89108751|ref|AP_002531.1| External link ew SF
  ew PF
gi|26248182|ref|NP_754222.1| External link e0 SF
  e0 PF
gi|91976651|ref|YP_569310.1| External link rr SF
  rr PF
gi|116692951|ref|YP_838484.1| External link 5l SF
  5l PF
gi|22125626|ref|NP_669049.1| External link yk SF
  yk PF
gi|116254365|ref|YP_770203.1| External link 17 SF
  17 PF
gi|89054792|ref|YP_510243.1| External link ja SF
  ja PF
gi|156933489|ref|YP_001437405.1| External link 69 SF
  69 PF
gi|161613489|ref|YP_001587454.1| External link 78 SF
  78 PF
gi|27376173|ref|NP_767702.1| External link bj SF
  bj PF
gi|90422223|ref|YP_530593.1| External link rg SF
  rg PF
gi|76811685|ref|YP_334182.1| External link bz SF
  bz PF
gi|152989200|ref|YP_001349253.1| External link 4j SF
  4j PF
gi|189023440|ref|YP_001934208.1| External link 91 SF
  91 PF
gi|161520286|ref|YP_001583713.1| External link 76 SF
  76 PF
gi|89053110|ref|YP_508561.1| External link ja SF
  ja PF
gi|116049852|ref|YP_791341.1| External link 2t SF
  2t PF
gi|145301148|ref|YP_001143989.1| External link 44 SF
  44 PF
gi|114799307|ref|YP_759854.1| External link 54 SF
  54 PF
gi|170737931|ref|YP_001779191.1| External link 7j SF
  7j PF
gi|108812215|ref|YP_647982.1| External link yn SF
  yn PF
gi|86356299|ref|YP_468191.1| External link rz SF
  rz PF
gi|126457399|ref|YP_001074949.1| External link 20 SF
  20 PF
gi|115359785|ref|YP_776923.1| External link 0u SF
  0u PF
gi|170737784|ref|YP_001779044.1| External link 7j SF
  7j PF
gi|66045102|ref|YP_234943.1| External link ud SF
  ud PF
gi|83594724|ref|YP_428476.1| External link rb SF
  rb PF
gi|99081053|ref|YP_613207.1| External link ic SF
  ic PF
gi|123441372|ref|YP_001005359.1| External link 1g SF
  1g PF
gi|146277748|ref|YP_001167907.1| External link 3k SF
  3k PF
gi|50120496|ref|YP_049663.1| External link er SF
  er PF
gi|83716463|ref|YP_440275.1| External link b5 SF
  b5 PF
gi|116250693|ref|YP_766531.1| External link 17 SF
  17 PF