DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: 'Cold-shock' DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Emihu1|463684|estExtDG_fgeneshEH_pg.C_310094 External link ex SF
  ex PF
jgi|Emihu1|470692|estExtDG_fgeneshEH_pg.C_5230006 External link ex SF
  ex PF
FBpp0206415 External link dz SF
  dz PF
jgi|Auran1|64934 External link a6 SF
  a6 PF
gi|29653384|ref|NP_819076.1| External link cx SF
  cx PF
gi|116751463|ref|YP_848150.1| External link 0l SF
  0l PF
gi|85857886|ref|YP_460088.1| External link yt SF
  yt PF
gi|119946330|ref|YP_944010.1| External link 0x SF
  0x PF
gi|86157882|ref|YP_464667.1| External link ae SF
  ae PF
gi|154706657|ref|YP_001423573.1| External link 2n SF
  2n PF
gi|77165898|ref|YP_344423.1| External link nr SF
  nr PF
gi|82702034|ref|YP_411600.1| External link nl SF
  nl PF
gi|182677540|ref|YP_001831686.1| External link 8q SF
  8q PF
gi|161830524|ref|YP_001597794.1| External link 5w SF
  5w PF
gi|121603732|ref|YP_981061.1| External link 01 SF
  01 PF
gi|75910292|ref|YP_324588.1| External link va SF
  va PF
gi|182678206|ref|YP_001832352.1| External link 8q SF
  8q PF
gi|51244938|ref|YP_064822.1| External link dp SF
  dp PF
gi|153003332|ref|YP_001377657.1| External link 55 SF
  55 PF
gi|162453873|ref|YP_001616240.1| External link 60 SF
  60 PF
gi|110635103|ref|YP_675311.1| External link 0p SF
  0p PF
jgi|Auran1|63880 External link a6 SF
  a6 PF
jgi|Auran1|61124 External link a6 SF
  a6 PF
jgi|Monbr1|33587|estExt_fgenesh2_pg.C_210098 External link ov SF
  ov PF
ENSLAFP00000014912 External link l1 SF
  l1 PF
ENSMMUP00000040499 External link ru SF
  ru PF
ENSLAFP00000014912 External link lk SF
  lk PF
GSTENP00023133001 External link t1 SF
  t1 PF
ENSSTOP00000002400 External link gb SF
  gb PF
scaffold_562.4 External link nk SF
  nk PF
ENSMMUP00000040499 External link r2 SF
  r2 PF
ENSXETP00000029118 External link xk SF
  xk PF
ENSDNOP00000011862 External link d5 SF
  d5 PF
scaffold_693.1 External link nk SF
  nk PF
ENSOCUP00000000262 External link o3 SF
  o3 PF
ENSTBEP00000005040 External link tz SF
  tz PF
ENSTBEP00000005040 External link t2 SF
  t2 PF
ENSSTOP00000002400 External link g3 SF
  g3 PF
ENSOCUP00000000262 External link ok SF
  ok PF
ENSXETP00000029118 External link xn SF
  xn PF
ENSDNOP00000011862 External link d6 SF
  d6 PF
ENSFCAP00000004685 External link fe SF
  fe PF
GSTENP00023133001 External link tn SF
  tn PF
ENSFCAP00000004685 External link f1 SF
  f1 PF
jgi|Auran1|60508 External link a6 SF
  a6 PF
gi|72116887|ref|XP_788134.1| External link tu SF
  tu PF
gi|115950839|ref|XP_001185543.1| External link tu SF
  tu PF
jgi|Selmo1|405045|fgenesh2_pg.C_scaffold_3000268 External link gj SF
  gj PF
jgi|ChlNC64A_1|145396|IGS.gm_9_00203 External link h2 SF
  h2 PF
jgi|Emihu1|119956|fgeneshEH_pg.550__5 External link ex SF
  ex PF