DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: GATA zinc finger.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
jgi|Ostta4|11798|fgenesh1_pg.C_Chr_07.0001000239 External link ou SF
  ou PF
UM05577.1 um SF
  um PF
jgi|Sporo1|33761|estExt_fgenesh1_pg.C_100133 External link yu SF
  yu PF
RO3G_01597.1 ry SF
  ry PF
RO3G_08436.1 ry SF
  ry PF
CC1G_00774.1 or SF
  or PF
RO3G_04195.1 ry SF
  ry PF
BDEG_01355 b8 SF
  b8 PF
jgi|Ost9901_3|93058|ost_07_016_033 External link oz SF
  oz PF
jgi|Naegr1|81728|estExt_fgeneshNG_pg.C_670076 External link eb SF
  eb PF
LOC_Os10g32070.1|12010.m06055|protein External link os SF
  os PF
jgi|Sorbi1|5044597|Sb08g004360 External link oj SF
  oj PF
jgi|Picst3|30840|fgenesh1_pg.C_chr_3.1000427 External link ip SF
  ip PF
ENSGALP00000030912 External link gh SF
  gh PF
ENSMODP00000020895 External link op SF
  op PF
gi|80476387|gb|AAI08545| External link xl SF
  xl PF
jgi|Triat1|33869|e_gw1.2.197.1 External link wt SF
  wt PF
AC190559.3_FGT008 External link ze SF
  ze PF
ENSCINP00000029510 External link is SF
  is PF
gi|147906903|ref|NP_001081962| External link xl SF
  xl PF
AGAP002235-PA External link ah SF
  ah PF
ENSORLP00000009688 External link o1 SF
  o1 PF
ENSORLP00000021732 External link ol SF
  ol PF
ENSTRUP00000025827 External link tq SF
  tq PF
ENSRNOP00000038111 External link ro SF
  ro PF
ENSXETP00000040139 External link xk SF
  xk PF
FBpp0128654 External link ge SF
  ge PF
scaffold_908.1 External link nk SF
  nk PF
ENSMICP00000002084 External link io SF
  io PF
ENSDARP00000090333 External link da SF
  da PF
ENSMMUP00000025244 External link ru SF
  ru PF
ENSEEUP00000004168 External link ek SF
  ek PF
ENSAPMP00000032642 External link aj SF
  aj PF
ENSDARP00000076594 External link da SF
  da PF
ENSMLUP00000005028 External link lu SF
  lu PF
ENSGACP00000001031 External link g1 SF
  g1 PF
ENSXETP00000001472 External link xn SF
  xn PF
ENSPTRP00000034232 External link xq SF
  xq PF
ENSCAFP00000007467 External link di SF
  di PF
ENSMODP00000015032 External link op SF
  op PF
ENSMLUP00000013490 External link l2 SF
  l2 PF
ENSORLP00000022114 External link ol SF
  ol PF
FBpp0119362 External link dk SF
  dk PF
ENSORLP00000001688 External link ol SF
  ol PF
gi|120964|sp|P23773| External link xl SF
  xl PF
ENSEEUP00000004173 External link ek SF
  ek PF
FBpp0081304 External link dd SF
  dd PF
ENSPPYP00000022746 External link of SF
  of PF
FBpp0115083 External link dk SF
  dk PF
ENSETEP00000015086 External link e3 SF
  e3 PF