DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Bacterial regulatory proteins, crp family.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|75908705|ref|YP_323001.1| External link va SF
  va PF
gi|17232056|ref|NP_488604.1| External link no SF
  no PF
gi|186682001|ref|YP_001865197.1| External link 9j SF
  9j PF
gi|120401841|ref|YP_951670.1| External link 28 SF
  28 PF
gi|169631138|ref|YP_001704787.1| External link 8c SF
  8c PF
gi|145220693|ref|YP_001131371.1| External link 4h SF
  4h PF
gi|255532386|ref|YP_003092758.1| External link p5 SF
  p5 PF
gi|37521337|ref|NP_924714.1| External link gv SF
  gv PF
gi|120435775|ref|YP_861461.1| External link 1s SF
  1s PF
gi|163850220|ref|YP_001638263.1| External link 6r SF
  6r PF
gi|110637540|ref|YP_677747.1| External link 37 SF
  37 PF
gi|37523132|ref|NP_926509.1| External link gv SF
  gv PF
30229.m006314 External link rk SF
  rk PF
gi|170760228|ref|YP_001788238.1| External link 8s SF
  8s PF
gi|192359726|ref|YP_001983119.1| External link 9m SF
  9m PF
gi|99081791|ref|YP_613945.1| External link ic SF
  ic PF
gi|127514161|ref|YP_001095358.1| External link 1r SF
  1r PF
gi|171058138|ref|YP_001790487.1| External link 7i SF
  7i PF
gi|119870932|ref|YP_940884.1| External link 46 SF
  46 PF
gi|83589675|ref|YP_429684.1| External link m8 SF
  m8 PF
gi|21910733|ref|NP_665001.1| External link s7 SF
  s7 PF
gi|52080456|ref|YP_079247.1| External link lf SF
  lf PF
gi|148559747|ref|YP_001258638.1| External link 1k SF
  1k PF
gi|15675678|ref|NP_269852.1| External link x2 SF
  x2 PF
gi|148238655|ref|YP_001224042.1| External link 29 SF
  29 PF
gi|163854272|ref|YP_001642315.1| External link 6r SF
  6r PF
gi|83269793|ref|YP_419084.1| External link by SF
  by PF
gi|37522854|ref|NP_926231.1| External link gv SF
  gv PF
gi|52785834|ref|YP_091663.1| External link lc SF
  lc PF
gi|62181970|ref|YP_218387.1| External link x6 SF
  x6 PF
gi|153010688|ref|YP_001371902.1| External link 40 SF
  40 PF
gi|53715989|ref|YP_104888.1| External link bi SF
  bi PF
gi|170754966|ref|YP_001780295.1| External link 8f SF
  8f PF
gi|184157481|ref|YP_001845820.1| External link 99 SF
  99 PF
gi|190576129|ref|YP_001973974.1| External link 9i SF
  9i PF
gi|153937427|ref|YP_001386879.1| External link 2u SF
  2u PF
gi|172041545|ref|YP_001801260.1| External link 7h SF
  7h PF
gi|170759838|ref|YP_001786009.1| External link 8s SF
  8s PF
gi|81429393|ref|YP_396394.1| External link ls SF
  ls PF
gi|92114257|ref|YP_574185.1| External link c8 SF
  c8 PF
gi|161620484|ref|YP_001594370.1| External link 6z SF
  6z PF
gi|20809102|ref|NP_624273.1| External link tt SF
  tt PF
gi|56419303|ref|YP_146621.1| External link gk SF
  gk PF
gi|90021111|ref|YP_526938.1| External link d0 SF
  d0 PF
gi|150025010|ref|YP_001295836.1| External link 5d SF
  5d PF
gi|53713437|ref|YP_099429.1| External link fa SF
  fa PF
gi|76787496|ref|YP_330343.1| External link a9 SF
  a9 PF
gi|89893121|ref|YP_516608.1| External link d2 SF
  d2 PF
gi|138894329|ref|YP_001124782.1| External link 1u SF
  1u PF
gi|19746785|ref|NP_607921.1| External link sx SF
  sx PF