DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: MerR family regulatory protein.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|134101571|ref|YP_001107232.1| External link 18 SF
  18 PF
gi|153954367|ref|YP_001395132.1| External link 16 SF
  16 PF
gi|110634779|ref|YP_674987.1| External link 0p SF
  0p PF
gi|121603330|ref|YP_980659.1| External link 01 SF
  01 PF
gi|148556322|ref|YP_001263904.1| External link 2i SF
  2i PF
gi|91779919|ref|YP_555127.1| External link b4 SF
  b4 PF
gi|86740789|ref|YP_481189.1| External link fk SF
  fk PF
ENSXETP00000008879 External link xn SF
  xn PF
gi|163845518|ref|YP_001623173.1| External link 6g SF
  6g PF
gi|161621242|ref|YP_001595128.1| External link 6z SF
  6z PF
ENSXETP00000008879 External link xk SF
  xk PF
125263 External link sj SF
  sj PF
gi|17988437|ref|NP_541070.1| External link bm SF
  bm PF
gi|23500914|ref|NP_700354.1| External link br SF
  br PF
gi|189023266|ref|YP_001933007.1| External link 91 SF
  91 PF
gi|62318015|ref|YP_223868.1| External link b3 SF
  b3 PF
gi|83269990|ref|YP_419281.1| External link by SF
  by PF
gi|148558746|ref|YP_001258048.1| External link 1k SF
  1k PF
gi|121603365|ref|YP_980694.1| External link 01 SF
  01 PF
gi|91790034|ref|YP_550986.1| External link p6 SF
  p6 PF
gi|32471191|ref|NP_864184.1| External link pi SF
  pi PF
gi|71280789|ref|YP_267128.1| External link lw SF
  lw PF
gi|29828260|ref|NP_822894.1| External link s9 SF
  s9 PF
gi|186475318|ref|YP_001856788.1| External link 90 SF
  90 PF
gi|115352633|ref|YP_774472.1| External link 0u SF
  0u PF
gi|148258735|ref|YP_001243320.1| External link 42 SF
  42 PF
gi|53718529|ref|YP_107515.1| External link pe SF
  pe PF
gi|53725881|ref|YP_103822.1| External link bi SF
  bi PF
gi|107023471|ref|YP_621798.1| External link b6 SF
  b6 PF
gi|170751250|ref|YP_001757510.1| External link 7w SF
  7w PF
gi|170733894|ref|YP_001765841.1| External link 7j SF
  7j PF
gi|91784081|ref|YP_559287.1| External link b4 SF
  b4 PF
gi|126452427|ref|YP_001065228.1| External link 20 SF
  20 PF
gi|94986344|ref|YP_605708.1| External link d4 SF
  d4 PF
gi|121601561|ref|YP_991904.1| External link 1m SF
  1m PF
gi|108757424|ref|YP_628678.1| External link m1 SF
  m1 PF
gi|161523941|ref|YP_001578953.1| External link 76 SF
  76 PF
gi|27375293|ref|NP_766822.1| External link bj SF
  bj PF
gi|160900340|ref|YP_001565922.1| External link 7d SF
  7d PF
gi|172061494|ref|YP_001809146.1| External link 85 SF
  85 PF
gi|116690554|ref|YP_836177.1| External link 5l SF
  5l PF
gi|159900658|ref|YP_001546905.1| External link 5u SF
  5u PF
gi|21224175|ref|NP_629954.1| External link sf SF
  sf PF
gi|78061998|ref|YP_371906.1| External link bk SF
  bk PF
gi|29828970|ref|NP_823604.1| External link s9 SF
  s9 PF
gi|110634733|ref|YP_674941.1| External link 0p SF
  0p PF
gi|146337742|ref|YP_001202790.1| External link 26 SF
  26 PF
gi|126450824|ref|YP_001081665.1| External link 1y SF
  1y PF
gi|91784999|ref|YP_560205.1| External link b4 SF
  b4 PF
27639.m000233 External link rk SF
  rk PF