DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Bacterial regulatory protein, arsR family.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|119357293|ref|YP_911937.1| External link 3v SF
  3v PF
gi|18977778|ref|NP_579135.1| External link pu SF
  pu PF
gi|14520956|ref|NP_126431.1| External link pb SF
  pb PF
gi|54309388|ref|YP_130408.1| External link he SF
  he PF
gi|71280619|ref|YP_270034.1| External link lw SF
  lw PF
gi|56461224|ref|YP_156505.1| External link il SF
  il PF
gi|156976331|ref|YP_001447237.1| External link 65 SF
  65 PF
gi|146306550|ref|YP_001187015.1| External link 4y SF
  4y PF
gi|91794899|ref|YP_564550.1| External link hw SF
  hw PF
gi|114565154|ref|YP_752668.1| External link 3w SF
  3w PF
gi|14590822|ref|NP_142894.1| External link ph SF
  ph PF
gi|150401570|ref|YP_001325336.1| External link 4v SF
  4v PF
gi|78045081|ref|YP_359689.1| External link c9 SF
  c9 PF
gi|150402954|ref|YP_001330248.1| External link 5j SF
  5j PF
gi|159905301|ref|YP_001548963.1| External link 66 SF
  66 PF
gi|18976379|ref|NP_577736.1| External link pu SF
  pu PF
gi|134046673|ref|YP_001098158.1| External link 0o SF
  0o PF
gi|57641400|ref|YP_183878.1| External link tk SF
  tk PF
gi|15668955|ref|NP_247759.1| External link mj SF
  mj PF
gi|169824999|ref|YP_001692610.1| External link 8g SF
  8g PF
gi|150399778|ref|YP_001323545.1| External link 57 SF
  57 PF
gi|45357596|ref|NP_987153.1| External link m2 SF
  m2 PF
gi|18977252|ref|NP_578609.1| External link pu SF
  pu PF
gi|14590821|ref|NP_142893.1| External link ph SF
  ph PF
gi|147921009|ref|YP_685181.1| External link 3n SF
  3n PF
gi|147920392|ref|YP_685833.1| External link 3n SF
  3n PF
gi|20088978|ref|NP_615053.1| External link ma SF
  ma PF
gi|148265553|ref|YP_001232259.1| External link 3g SF
  3g PF
gi|162448982|ref|YP_001611349.1| External link 60 SF
  60 PF
gi|57639998|ref|YP_182476.1| External link tk SF
  tk PF
gi|170289592|ref|YP_001739830.1| External link 92 SF
  92 PF
gi|157364171|ref|YP_001470938.1| External link 5v SF
  5v PF
gi|15643738|ref|NP_228786.1| External link tm SF
  tm PF
gi|148270880|ref|YP_001245340.1| External link 0v SF
  0v PF
gi|146303993|ref|YP_001191309.1| External link 02 SF
  02 PF
gi|54027475|ref|YP_121717.1| External link nf SF
  nf PF
gi|15839977|ref|NP_335014.1| External link mu SF
  mu PF
gi|148660345|ref|YP_001281868.1| External link 4q SF
  4q PF
gi|86739698|ref|YP_480098.1| External link fk SF
  fk PF
gi|134097457|ref|YP_001103118.1| External link 18 SF
  18 PF
gi|116330039|ref|YP_799757.1| External link 3h SF
  3h PF
gi|148821777|ref|YP_001286531.1| External link 51 SF
  51 PF
gi|119868768|ref|YP_938720.1| External link 46 SF
  46 PF
gi|169628083|ref|YP_001701732.1| External link 8c SF
  8c PF
gi|126435302|ref|YP_001070993.1| External link 22 SF
  22 PF
gi|120405638|ref|YP_955467.1| External link 28 SF
  28 PF
gi|159897101|ref|YP_001543348.1| External link 5u SF
  5u PF
gi|116329360|ref|YP_799080.1| External link 0k SF
  0k PF
gi|15607716|ref|NP_215090.1| External link mb SF
  mb PF
gi|31791758|ref|NP_854251.1| External link mc SF
  mc PF