DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: MarR family.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
jgi|Phypa1_1|103531|fgenesh1_pg.scaffold_2883000002 External link pw SF
  pw PF
gi|91780952|ref|YP_556159.1| External link b4 SF
  b4 PF
gi|156741702|ref|YP_001431831.1| External link 77 SF
  77 PF
Pa_1_12450 nq SF
  nq PF
gi|169829354|ref|YP_001699512.1| External link 7z SF
  7z PF
gi|21218626|ref|NP_624405.1| External link sf SF
  sf PF
gi|86749166|ref|YP_485662.1| External link rj SF
  rj PF
gi|166364842|ref|YP_001657115.1| External link 84 SF
  84 PF
gi|166363224|ref|YP_001655497.1| External link 84 SF
  84 PF
gi|166366282|ref|YP_001658555.1| External link 84 SF
  84 PF
gi|166364966|ref|YP_001657239.1| External link 84 SF
  84 PF
gi|166368798|ref|YP_001661071.1| External link 84 SF
  84 PF
gi|166367097|ref|YP_001659370.1| External link 84 SF
  84 PF
gi|166366769|ref|YP_001659042.1| External link 84 SF
  84 PF
gi|166366284|ref|YP_001658557.1| External link 84 SF
  84 PF
gi|16759626|ref|NP_455243.1| External link ty SF
  ty PF
gi|117622876|ref|YP_851789.1| External link 1j SF
  1j PF
gi|91209708|ref|YP_539694.1| External link e2 SF
  e2 PF
gi|152969261|ref|YP_001334370.1| External link 2k SF
  2k PF
gi|62179273|ref|YP_215690.1| External link x6 SF
  x6 PF
gi|24112038|ref|NP_706548.1| External link s0 SF
  s0 PF
gi|194448029|ref|YP_002044711.1| External link 9r SF
  9r PF
gi|157146722|ref|YP_001454041.1| External link 5x SF
  5x PF
gi|156978374|ref|YP_001440633.1| External link 71 SF
  71 PF
gi|170681967|ref|YP_001742785.1| External link 8k SF
  8k PF
gi|16122838|ref|NP_406151.1| External link yp SF
  yp PF
gi|189440720|ref|YP_001955801.1| External link e6 SF
  e6 PF
gi|51595464|ref|YP_069655.1| External link yr SF
  yr PF
gi|189439069|ref|YP_001954150.1| External link e6 SF
  e6 PF
gi|119026113|ref|YP_909958.1| External link 5g SF
  5g PF
gi|15800378|ref|NP_286390.1| External link e1 SF
  e1 PF
gi|187732647|ref|YP_001879326.1| External link ez SF
  ez PF
gi|110804687|ref|YP_688207.1| External link 3s SF
  3s PF
gi|186894495|ref|YP_001871607.1| External link 9g SF
  9g PF
gi|161615101|ref|YP_001589066.1| External link 78 SF
  78 PF
gi|117621506|ref|YP_856062.1| External link 33 SF
  33 PF
gi|15923034|ref|NP_370568.1| External link sa SF
  sa PF
gi|26246641|ref|NP_752681.1| External link e0 SF
  e0 PF
gi|108811274|ref|YP_647041.1| External link yn SF
  yn PF
gi|74311204|ref|YP_309623.1| External link on SF
  on PF
gi|89107534|ref|AP_001314.1| External link ew SF
  ew PF
gi|145299753|ref|YP_001142594.1| External link 44 SF
  44 PF
gi|162421808|ref|YP_001604944.1| External link 6m SF
  6m PF
gi|194442984|ref|YP_002039919.1| External link 8y SF
  8y PF
gi|30062149|ref|NP_836320.1| External link fs SF
  fs PF
gi|16764052|ref|NP_459667.1| External link su SF
Gene name: nagC  su PF
gi|82775945|ref|YP_402292.1| External link d1 SF
  d1 PF
gi|29142601|ref|NP_805943.1| External link es SF
  es PF
gi|146310849|ref|YP_001175923.1| External link 08 SF
  08 PF
gi|22125103|ref|NP_668526.1| External link yk SF
  yk PF