DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Arginine repressor, DNA binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|146310113|ref|YP_001175187.1| External link 08 SF
  08 PF
gi|29833309|ref|NP_827943.1| External link s9 SF
  s9 PF
gi|29144742|ref|NP_808084.1| External link es SF
  es PF
gi|76788451|ref|YP_329233.1| External link a9 SF
  a9 PF
gi|15643139|ref|NP_228182.1| External link tm SF
  tm PF
gi|85058337|ref|YP_454039.1| External link og SF
  og PF
gi|145224109|ref|YP_001134787.1| External link 4h SF
  4h PF
gi|78186907|ref|YP_374950.1| External link p7 SF
  p7 PF
gi|19746991|ref|NP_608127.1| External link sx SF
  sx PF
gi|24379062|ref|NP_721017.1| External link s6 SF
  s6 PF
gi|30264250|ref|NP_846627.1| External link ba SF
  ba PF
gi|152976579|ref|YP_001376096.1| External link 0w SF
  0w PF
gi|83590351|ref|YP_430360.1| External link m8 SF
  m8 PF
gi|51892974|ref|YP_075665.1| External link sb SF
  sb PF
gi|89898272|ref|YP_515382.1| External link c6 SF
  c6 PF
gi|110803977|ref|YP_697498.1| External link 5n SF
  5n PF
gi|15900776|ref|NP_345380.1| External link sr SF
  sr PF
gi|152974183|ref|YP_001373700.1| External link 0w SF
  0w PF
gi|150394072|ref|YP_001316747.1| External link 1i SF
  1i PF
gi|161506086|ref|YP_001573198.1| External link 70 SF
  70 PF
gi|153002193|ref|YP_001367874.1| External link 1a SF
  1a PF
gi|145600813|ref|YP_001164889.1| External link 5h SF
  5h PF
gi|145297724|ref|YP_001140565.1| External link 44 SF
  44 PF
gi|146313306|ref|YP_001178380.1| External link 08 SF
  08 PF
gi|33151503|ref|NP_872856.1| External link hd SF
  hd PF
gi|62181868|ref|YP_218285.1| External link x6 SF
  x6 PF
gi|50914595|ref|YP_060567.1| External link sp SF
  sp PF
gi|167628431|ref|YP_001678930.1| External link 8j SF
  8j PF
gi|54293479|ref|YP_125894.1| External link lg SF
  lg PF
gi|169833673|ref|YP_001694640.1| External link 8e SF
  8e PF
gi|119962828|ref|YP_947402.1| External link 56 SF
  56 PF
gi|125717533|ref|YP_001034666.1| External link 5b SF
  5b PF
gi|118476117|ref|YP_893268.1| External link 31 SF
  31 PF
gi|125625077|ref|YP_001033560.1| External link 39 SF
  39 PF
gi|161617752|ref|YP_001591717.1| External link 78 SF
  78 PF
gi|94989448|ref|YP_597549.1| External link pk SF
  pk PF
gi|145295534|ref|YP_001138355.1| External link 4e SF
  4e PF
gi|15675400|ref|NP_269574.1| External link x2 SF
  x2 PF
gi|15674021|ref|NP_268196.1| External link ll SF
  ll PF
gi|169824535|ref|YP_001692146.1| External link 8g SF
  8g PF
gi|68249755|ref|YP_248867.1| External link hf SF
  hf PF
gi|146321976|ref|YP_001201687.1| External link 2h SF
  2h PF
gi|120404284|ref|YP_954113.1| External link 28 SF
  28 PF
gi|52787839|ref|YP_093668.1| External link lc SF
  lc PF
gi|15901894|ref|NP_346498.1| External link sr SF
  sr PF
gi|74313768|ref|YP_312187.1| External link on SF
  on PF
gi|158320637|ref|YP_001513144.1| External link 68 SF
  68 PF
gi|15903930|ref|NP_359480.1| External link st SF
  st PF
gi|56420925|ref|YP_148243.1| External link gk SF
  gk PF
gi|170025977|ref|YP_001722482.1| External link 8r SF
  8r PF