DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Iron dependent repressor, N-terminal DNA binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|145596844|ref|YP_001161141.1| External link 1h SF
  1h PF
gi|134098357|ref|YP_001104018.1| External link 18 SF
  18 PF
gi|111018811|ref|YP_701783.1| External link 3r SF
  3r PF
gi|153941093|ref|YP_001390195.1| External link 5c SF
  5c PF
gi|148269647|ref|YP_001244107.1| External link 0v SF
  0v PF
gi|88602627|ref|YP_502805.1| External link m6 SF
  m6 PF
gi|50913737|ref|YP_059709.1| External link sp SF
  sp PF
gi|116516746|ref|YP_816907.1| External link 47 SF
  47 PF
gi|191637654|ref|YP_001986820.1| External link 95 SF
  95 PF
gi|119715026|ref|YP_921991.1| External link 0j SF
  0j PF
gi|90962452|ref|YP_536368.1| External link lv SF
  lv PF
gi|117927400|ref|YP_871951.1| External link 3q SF
  3q PF
gi|182436865|ref|YP_001824584.1| External link 7n SF
  7n PF
gi|118618674|ref|YP_907006.1| External link 5o SF
  5o PF
gi|15842326|ref|NP_337363.1| External link mu SF
  mu PF
gi|21222420|ref|NP_628199.1| External link sf SF
  sf PF
gi|148658625|ref|YP_001278830.1| External link 4a SF
  4a PF
gi|38233226|ref|NP_938993.1| External link cd SF
  cd PF
gi|157150924|ref|YP_001451085.1| External link 6s SF
  6s PF
gi|21674552|ref|NP_662617.1| External link ch SF
  ch PF
gi|68536571|ref|YP_251276.1| External link jk SF
  jk PF
gi|15678242|ref|NP_275357.1| External link md SF
  md PF
gi|29830398|ref|NP_825032.1| External link s9 SF
  s9 PF
gi|70727261|ref|YP_254177.1| External link zh SF
  zh PF
gi|38233999|ref|NP_939766.1| External link cd SF
  cd PF
gi|139474306|ref|YP_001129022.1| External link 4z SF
  4z PF
gi|147920271|ref|YP_685959.1| External link 3n SF
  3n PF
gi|68536174|ref|YP_250879.1| External link jk SF
  jk PF
gi|29375587|ref|NP_814741.1| External link ef SF
  ef PF
gi|148662630|ref|YP_001284153.1| External link 4q SF
  4q PF
gi|57651475|ref|YP_185573.1| External link x8 SF
  x8 PF
gi|86739140|ref|YP_479540.1| External link fk SF
  fk PF
gi|94989879|ref|YP_597979.1| External link ts SF
  ts PF
gi|19553124|ref|NP_601126.1| External link c3 SF
  c3 PF
gi|15789756|ref|NP_279580.1| External link hb SF
  hb PF
gi|172039811|ref|YP_001799525.1| External link 7h SF
  7h PF
gi|120437529|ref|YP_863215.1| External link 1s SF
  1s PF
gi|62390760|ref|YP_226162.1| External link cb SF
  cb PF
gi|118473748|ref|YP_886989.1| External link 3e SF
  3e PF
gi|15609925|ref|NP_217304.1| External link mb SF
  mb PF
gi|159037052|ref|YP_001536305.1| External link 61 SF
  61 PF
gi|15922357|ref|NP_378026.1| External link sv SF
  sv PF
gi|72160653|ref|YP_288310.1| External link tf SF
  tf PF
gi|148273651|ref|YP_001223212.1| External link 32 SF
  32 PF
gi|163846703|ref|YP_001634747.1| External link 6w SF
  6w PF
gi|116334289|ref|YP_795816.1| External link 52 SF
  52 PF
gi|83816669|ref|YP_446151.1| External link rv SF
  rv PF
gi|134102468|ref|YP_001108129.1| External link 18 SF
  18 PF
gi|15842249|ref|NP_337286.1| External link mu SF
  mu PF
gi|148823900|ref|YP_001288654.1| External link 51 SF
  51 PF