DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Helix-turn-helix.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|150401148|ref|YP_001324914.1| External link 4v SF
  4v PF
gi|15668345|ref|NP_247141.1| External link mj SF
  mj PF
gi|162452146|ref|YP_001614513.1| External link 60 SF
  60 PF
gi|15644069|ref|NP_229118.1| External link tm SF
  tm PF
gi|125625208|ref|YP_001033691.1| External link 39 SF
  39 PF
gi|170289297|ref|YP_001739535.1| External link 92 SF
  92 PF
gi|58337889|ref|YP_194474.1| External link lt SF
  lt PF
gi|157364079|ref|YP_001470846.1| External link 5v SF
  5v PF
gi|159040050|ref|YP_001539303.1| External link 61 SF
  61 PF
gi|15922829|ref|NP_378498.1| External link sv SF
  sv PF
gi|118602530|ref|YP_903745.1| External link 5f SF
  5f PF
gi|15669611|ref|NP_248424.1| External link mj SF
  mj PF
CC1G_09063.1 or SF
  or PF
gi|159900885|ref|YP_001547132.1| External link 5u SF
  5u PF
gi|182677933|ref|YP_001832079.1| External link 8q SF
  8q PF
gi|154248057|ref|YP_001419015.1| External link 2d SF
  2d PF
gi|170746831|ref|YP_001753091.1| External link 7w SF
  7w PF
gi|163851008|ref|YP_001639051.1| External link 6r SF
  6r PF
gi|170740720|ref|YP_001769375.1| External link 7s SF
  7s PF
gi|163854255|ref|YP_001642298.1| External link 6r SF
  6r PF
gi|163853226|ref|YP_001641269.1| External link 6r SF
  6r PF
gi|86606494|ref|YP_475257.1| External link cg SF
  cg PF
gi|75906669|ref|YP_320965.1| External link va SF
  va PF
gi|113475555|ref|YP_721616.1| External link 4i SF
  4i PF
gi|17230004|ref|NP_486552.1| External link no SF
  no PF
gi|75910458|ref|YP_324754.1| External link va SF
  va PF
gi|186680864|ref|YP_001864060.1| External link 9j SF
  9j PF
gi|172036813|ref|YP_001803314.1| External link 8t SF
  8t PF
gi|86607899|ref|YP_476661.1| External link c7 SF
  c7 PF
gi|150401065|ref|YP_001324831.1| External link 4v SF
  4v PF
gi|15679549|ref|NP_276666.1| External link md SF
  md PF
gi|108799589|ref|YP_639786.1| External link yb SF
  yb PF
gi|119871924|ref|YP_929931.1| External link 34 SF
  34 PF
gi|171185721|ref|YP_001794640.1| External link 8h SF
  8h PF
gi|14520699|ref|NP_126174.1| External link pb SF
  pb PF
gi|118430859|ref|NP_146931.2| External link ap SF
  ap PF
gi|145592300|ref|YP_001154302.1| External link 5a SF
  5a PF
gi|57641424|ref|YP_183902.1| External link tk SF
  tk PF
gi|18978107|ref|NP_579464.1| External link pu SF
  pu PF
gi|124027196|ref|YP_001012516.1| External link 5m SF
  5m PF
gi|126458825|ref|YP_001055103.1| External link 4u SF
  4u PF
gi|170290018|ref|YP_001736834.1| External link 7v SF
  7v PF
gi|14591453|ref|NP_143533.1| External link ph SF
  ph PF
gi|15669613|ref|NP_248426.1| External link mj SF
  mj PF
gi|15668436|ref|NP_247234.1| External link mj SF
  mj PF
gi|57642153|ref|YP_184631.1| External link tk SF
  tk PF
gi|14520328|ref|NP_125803.1| External link pb SF
  pb PF
gi|158522276|ref|YP_001530146.1| External link 6c SF
  6c PF
gi|15676964|ref|NP_274115.1| External link nm SF
  nm PF
gi|15794215|ref|NP_284037.1| External link nn SF
  nn PF