DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Helix-turn-helix domain, rpiR family.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|126448338|ref|YP_001081914.1| External link 1y SF
  1y PF
gi|152970319|ref|YP_001335428.1| External link 2k SF
  2k PF
gi|15901185|ref|NP_345789.1| External link sr SF
  sr PF
gi|76809618|ref|YP_333236.1| External link bz SF
  bz PF
gi|52424253|ref|YP_087390.1| External link m3 SF
  m3 PF
gi|21221516|ref|NP_627295.1| External link sf SF
  sf PF
gi|150015859|ref|YP_001308113.1| External link 03 SF
  03 PF
gi|15672394|ref|NP_266568.1| External link ll SF
  ll PF
gi|126432838|ref|YP_001068529.1| External link 22 SF
  22 PF
gi|88196241|ref|YP_501060.1| External link aq SF
  aq PF
gi|110800351|ref|YP_694646.1| External link 2f SF
  2f PF
gi|15803571|ref|NP_289604.1| External link e1 SF
  e1 PF
gi|157147977|ref|YP_001455296.1| External link 5x SF
  5x PF
gi|121600081|ref|YP_991715.1| External link 1m SF
  1m PF
gi|49484531|ref|YP_041755.1| External link a0 SF
  a0 PF
gi|117624005|ref|YP_852918.1| External link 1j SF
  1j PF
gi|72080618|ref|YP_287676.1| External link hu SF
  hu PF
gi|27468809|ref|NP_765446.1| External link s3 SF
  s3 PF
gi|172060402|ref|YP_001808054.1| External link 85 SF
  85 PF
gi|170019802|ref|YP_001724756.1| External link 9d SF
  9d PF
gi|89899925|ref|YP_522396.1| External link rx SF
  rx PF
gi|161508458|ref|YP_001574117.1| External link 6o SF
  6o PF
gi|192362396|ref|YP_001980871.1| External link 9m SF
  9m PF
gi|125625226|ref|YP_001033709.1| External link 39 SF
  39 PF
gi|170023494|ref|YP_001719999.1| External link 8r SF
  8r PF
30231.m003611 External link rk SF
  rk PF
gi|15612744|ref|NP_241047.1| External link bh SF
  bh PF
gi|15674168|ref|NP_268343.1| External link ll SF
  ll PF
gi|116511632|ref|YP_808848.1| External link 4o SF
  4o PF
gi|110799747|ref|YP_695784.1| External link 2f SF
  2f PF
gi|33597788|ref|NP_885431.1| External link bp SF
  bp PF
gi|117618945|ref|YP_854938.1| External link 33 SF
  33 PF
gi|148273373|ref|YP_001222934.1| External link 32 SF
  32 PF
gi|186476354|ref|YP_001857824.1| External link 90 SF
  90 PF
gi|194364116|ref|YP_002026726.1| External link e9 SF
  e9 PF
gi|194449540|ref|YP_002045940.1| External link 9r SF
  9r PF
gi|187733824|ref|YP_001880656.1| External link ez SF
  ez PF
gi|147675662|ref|YP_001217316.1| External link 15 SF
  15 PF
gi|104781756|ref|YP_608254.1| External link pq SF
  pq PF
gi|157690954|ref|YP_001485416.1| External link 6f SF
  6f PF
gi|51595214|ref|YP_069405.1| External link yr SF
  yr PF
gi|108811376|ref|YP_647143.1| External link yn SF
  yn PF
gi|150016763|ref|YP_001309017.1| External link 03 SF
  03 PF
gi|20807667|ref|NP_622838.1| External link tt SF
  tt PF
gi|91777476|ref|YP_552684.1| External link b4 SF
  b4 PF
gi|94993610|ref|YP_601708.1| External link tg SF
  tg PF
gi|58337456|ref|YP_194041.1| External link lt SF
  lt PF
gi|33152451|ref|NP_873804.1| External link hd SF
  hd PF
gi|91786053|ref|YP_547005.1| External link p6 SF
  p6 PF
gi|148270665|ref|YP_001245125.1| External link 0v SF
  0v PF