DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: HxlR-like helix-turn-helix.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|15841187|ref|NP_336224.1| External link mu SF
  mu PF
gi|33602826|ref|NP_890386.1| External link bo SF
  bo PF
gi|182680133|ref|YP_001834279.1| External link 8q SF
  8q PF
gi|145225812|ref|YP_001136490.1| External link 4h SF
  4h PF
gi|109898125|ref|YP_661380.1| External link px SF
  px PF
gi|120402047|ref|YP_951876.1| External link 28 SF
  28 PF
gi|182439342|ref|YP_001827061.1| External link 7n SF
  7n PF
gi|91789231|ref|YP_550183.1| External link p6 SF
  p6 PF
gi|15608863|ref|NP_216241.1| External link mb SF
  mb PF
gi|29828549|ref|NP_823183.1| External link s9 SF
  s9 PF
gi|116254239|ref|YP_770077.1| External link 17 SF
  17 PF
gi|33591997|ref|NP_879641.1| External link be SF
  be PF
gi|121637633|ref|YP_977856.1| External link 07 SF
  07 PF
gi|183981640|ref|YP_001849931.1| External link 8u SF
  8u PF
gi|148661523|ref|YP_001283046.1| External link 4q SF
  4q PF
gi|21224545|ref|NP_630324.1| External link sf SF
  sf PF
gi|110634441|ref|YP_674649.1| External link 0p SF
  0p PF
gi|148822931|ref|YP_001287685.1| External link 51 SF
  51 PF
gi|54024467|ref|YP_118709.1| External link nf SF
  nf PF
gi|118618725|ref|YP_907057.1| External link 5o SF
  5o PF
gi|126434373|ref|YP_001070064.1| External link 22 SF
  22 PF
gi|108798771|ref|YP_638968.1| External link yb SF
  yb PF
gi|13471772|ref|NP_103339.1| External link mk SF
  mk PF
gi|33597921|ref|NP_885564.1| External link bp SF
  bp PF
gi|159898044|ref|YP_001544291.1| External link 5u SF
  5u PF
gi|119867889|ref|YP_937841.1| External link 46 SF
  46 PF
gi|159037798|ref|YP_001537051.1| External link 61 SF
  61 PF
gi|29827061|ref|NP_821695.1| External link s9 SF
  s9 PF
gi|31792913|ref|NP_855406.1| External link mc SF
  mc PF
30220.m002069 External link rk SF
  rk PF
gi|55380323|ref|YP_138172.1| External link hm SF
  hm PF
30224.m006238 External link rk SF
  rk PF
gi|103486500|ref|YP_616061.1| External link ak SF
  ak PF
gi|119869189|ref|YP_939141.1| External link 46 SF
  46 PF
gi|167645234|ref|YP_001682897.1| External link 7o SF
  7o PF
gi|126435696|ref|YP_001071387.1| External link 22 SF
  22 PF
gi|120405890|ref|YP_955719.1| External link 28 SF
  28 PF
gi|16127342|ref|NP_421906.1| External link cc SF
  cc PF
gi|145222396|ref|YP_001133074.1| External link 4h SF
  4h PF
gi|118471753|ref|YP_889844.1| External link 3e SF
  3e PF
gi|108800063|ref|YP_640260.1| External link yb SF
  yb PF
gi|182435699|ref|YP_001823418.1| External link 7n SF
  7n PF
gi|116053837|ref|YP_788274.1| External link 2t SF
  2t PF
gi|52786541|ref|YP_092370.1| External link lc SF
  lc PF
gi|134099424|ref|YP_001105085.1| External link 18 SF
  18 PF
gi|81428149|ref|YP_395149.1| External link ls SF
  ls PF
gi|71904432|ref|YP_281235.1| External link zy SF
  zy PF
jgi|Phypa1_1|104069|fgenesh1_pg.scaffold_8128000001 External link pw SF
  pw PF
gi|29831418|ref|NP_826052.1| External link s9 SF
  s9 PF
gi|49187921|ref|YP_031174.1| External link b0 SF
  b0 PF