DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: LexA DNA binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|75907420|ref|YP_321716.1| External link va SF
  va PF
gi|17231740|ref|NP_488288.1| External link no SF
  no PF
jgi|Triat1|79910|fgenesh1_pm.C_scaffold_4000365 External link wt SF
  wt PF
jgi|Helro1|170399 External link hx SF
  hx PF
gi|33866809|ref|NP_898368.1| External link sy SF
  sy PF
gi|148243371|ref|YP_001228528.1| External link 48 SF
  48 PF
gi|46200250|ref|YP_005917.1| External link t0 SF
  t0 PF
gi|55980027|ref|YP_143324.1| External link tr SF
  tr PF
gi|190889997|ref|YP_001976539.1| External link 9p SF
  9p PF
gi|116250112|ref|YP_765950.1| External link 17 SF
  17 PF
gi|13476067|ref|NP_107637.1| External link mk SF
  mk PF
gi|83643850|ref|YP_432285.1| External link hc SF
  hc PF
gi|152974504|ref|YP_001374021.1| External link 0w SF
  0w PF
gi|86355985|ref|YP_467877.1| External link rz SF
  rz PF
gi|28901069|ref|NP_800724.1| External link vp SF
  vp PF
gi|83592508|ref|YP_426260.1| External link rb SF
  rb PF
gi|16800408|ref|NP_470676.1| External link li SF
  li PF
gi|161524810|ref|YP_001579822.1| External link 76 SF
  76 PF
gi|156932314|ref|YP_001436230.1| External link 69 SF
  69 PF
gi|116327807|ref|YP_797527.1| External link 0k SF
  0k PF
gi|56963932|ref|YP_175663.1| External link x4 SF
  x4 PF
gi|163846070|ref|YP_001634114.1| External link 6w SF
  6w PF
gi|183220706|ref|YP_001838702.1| External link 83 SF
  83 PF
gi|182415864|ref|YP_001820930.1| External link 8i SF
  8i PF
gi|21231174|ref|NP_637091.1| External link xd SF
  xd PF
gi|160899002|ref|YP_001564584.1| External link 7d SF
  7d PF
gi|58583065|ref|YP_202081.1| External link xo SF
  xo PF
gi|62182686|ref|YP_219103.1| External link x6 SF
  x6 PF
gi|147670021|ref|YP_001214839.1| External link 10 SF
  10 PF
gi|84624451|ref|YP_451823.1| External link xz SF
  xz PF
gi|26989835|ref|NP_745260.1| External link ps SF
  ps PF
gi|116748371|ref|YP_845058.1| External link 0l SF
  0l PF
gi|78779740|ref|YP_397852.1| External link p9 SF
  p9 PF
gi|30021787|ref|NP_833418.1| External link bc SF
  bc PF
gi|15640124|ref|NP_229751.1| External link vc SF
  vc PF
gi|54307386|ref|YP_128406.1| External link he SF
  he PF
gi|73541696|ref|YP_296216.1| External link rl SF
  rl PF
gi|110680397|ref|YP_683404.1| External link 2r SF
  2r PF
gi|30263637|ref|NP_846014.1| External link ba SF
  ba PF
gi|49475607|ref|YP_033648.1| External link ho SF
  ho PF
gi|16803342|ref|NP_464827.1| External link lm SF
  lm PF
gi|87200045|ref|YP_497302.1| External link nv SF
  nv PF
gi|151221463|ref|YP_001332285.1| External link 5p SF
  5p PF
gi|91213566|ref|YP_543552.1| External link e2 SF
  e2 PF
gi|88195063|ref|YP_499863.1| External link aq SF
  aq PF
gi|116670029|ref|YP_830962.1| External link 1f SF
  1f PF
gi|120596968|ref|YP_961542.1| External link 4g SF
  4g PF
gi|15614919|ref|NP_243222.1| External link bh SF
  bh PF
gi|163941295|ref|YP_001646179.1| External link 62 SF
  62 PF
gi|33592856|ref|NP_880500.1| External link be SF
  be PF