DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Sugar-specific transcriptional regulator TrmB.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|134101244|ref|YP_001106905.1| External link 18 SF
  18 PF
gi|14520328|ref|NP_125803.1| External link pb SF
  pb PF
gi|14521585|ref|NP_127061.1| External link pb SF
  pb PF
gi|184199923|ref|YP_001854130.1| External link 98 SF
  98 PF
gi|119962861|ref|YP_947218.1| External link 56 SF
  56 PF
gi|182436087|ref|YP_001823806.1| External link 7n SF
  7n PF
gi|182435159|ref|YP_001822878.1| External link 7n SF
  7n PF
gi|29826626|ref|NP_821260.1| External link s9 SF
  s9 PF
gi|29828623|ref|NP_823257.1| External link s9 SF
  s9 PF
gi|21219859|ref|NP_625638.1| External link sf SF
  sf PF
gi|111223790|ref|YP_714584.1| External link 1b SF
  1b PF
gi|163849270|ref|YP_001637314.1| External link 6w SF
  6w PF
gi|33597685|ref|NP_885328.1| External link bp SF
  bp PF
gi|55379857|ref|YP_137707.1| External link hm SF
  hm PF
gi|18976868|ref|NP_578225.1| External link pu SF
  pu PF
gi|33602531|ref|NP_890091.1| External link bo SF
  bo PF
gi|21226248|ref|NP_632170.1| External link mz SF
  mz PF
gi|116686751|ref|YP_839998.1| External link 5l SF
  5l PF
gi|33359332|ref|NP_142735.2| External link ph SF
  ph PF
gi|55377094|ref|YP_134944.1| External link hm SF
  hm PF
gi|107023007|ref|YP_621334.1| External link b6 SF
  b6 PF
gi|147919931|ref|YP_686316.1| External link 3n SF
  3n PF
gi|76801902|ref|YP_326910.1| External link np SF
  np PF
gi|16081939|ref|NP_394349.1| External link ta SF
  ta PF
gi|169236536|ref|YP_001689736.1| External link 8m SF
  8m PF
gi|161527626|ref|YP_001581452.1| External link 6e SF
  6e PF
gi|33592082|ref|NP_879726.1| External link be SF
  be PF
gi|55379029|ref|YP_136879.1| External link hm SF
  hm PF
gi|16554505|ref|NP_444229.1| External link hb SF
  hb PF
gi|62391905|ref|YP_227307.1| External link cb SF
  cb PF
gi|145297048|ref|YP_001139869.1| External link 4e SF
  4e PF
gi|108803612|ref|YP_643549.1| External link rw SF
  rw PF
gi|54025318|ref|YP_119560.1| External link nf SF
  nf PF
gi|23466082|ref|NP_696685.1| External link bl SF
  bl PF
gi|111017340|ref|YP_700312.1| External link 3r SF
  3r PF
gi|189440488|ref|YP_001955569.1| External link e6 SF
  e6 PF
gi|167038360|ref|YP_001665938.1| External link 82 SF
  82 PF
gi|163857773|ref|YP_001632071.1| External link 5y SF
  5y PF
gi|33592941|ref|NP_880585.1| External link be SF
  be PF
gi|33591907|ref|NP_879551.1| External link be SF
  be PF
gi|21221003|ref|NP_626782.1| External link sf SF
  sf PF
gi|158424508|ref|YP_001525800.1| External link 75 SF
  75 PF
gi|54025212|ref|YP_119454.1| External link nf SF
  nf PF
gi|189440487|ref|YP_001955568.1| External link e6 SF
  e6 PF
gi|91777800|ref|YP_553008.1| External link b4 SF
  b4 PF
gi|154244876|ref|YP_001415834.1| External link 2d SF
  2d PF
gi|33596877|ref|NP_884520.1| External link bp SF
  bp PF
gi|27380394|ref|NP_771923.1| External link bj SF
  bj PF
gi|33598194|ref|NP_885837.1| External link bp SF
  bp PF
gi|33603090|ref|NP_890650.1| External link bo SF
  bo PF