DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
Gm0097x00092 yg SF
  yg PF
scaffold_106.39 External link nk SF
  nk PF
AC183941.3_FGT024 External link ze SF
  ze PF
AC191543.2_FGT024 External link ze SF
  ze PF
AC204607.1_FGT026 External link ze SF
  ze PF
jgi|ChlNC64A_1|53340|fgenesh3_pg.C_scaffold_15000025 External link h2 SF
  h2 PF
ENSDARP00000090345 External link da SF No hits
  da PF
FBpp0226968 External link du SF No hits
  du PF
ENSRNOP00000017945 External link rn SF No hits
  rn PF
jgi|Poptr1_1|815791|estExt_fgenesh4_pg.C_LG_I2903 External link pt SF No hits
  pt PF
AN7545.2 an SF No hits
  an PF
jgi|Capca1|219591|estExt_fgenesh1_pg.C_310075 External link i1 SF No hits
  i1 PF
AC194295.3_FGT029 External link ze SF No hits
  ze PF
jgi|Dappu1|300656|PASA_GEN_10700008 External link d7 SF No hits
  d7 PF
Gm0015x00983.1 yg SF No hits
  yg PF
ENSPPYP00000018553 External link o5 SF No hits
  o5 PF
gi|71679782|gb|AAI00179| External link xl SF No hits
  xl PF
ENSECAP00000006193 External link eq SF No hits
  eq PF
T08D10.1 External link ce SF No hits
Gene name: CE03642  ce PF
jgi|Sorbi1|5050102|Sb01g045500 External link oj SF No hits
  oj PF
gi|148232437|ref|NP_001084208| External link xl SF No hits
  xl PF
AT1G72830.2 External link at SF No hits
  at PF
LOC_Os03g48970.1|12003.m09898|protein External link os SF No hits
  os PF
AC206274.1_FGT031 External link ze SF No hits
  ze PF
LOC_Os03g48970.2|12003.m34908|protein External link os SF No hits
  os PF
LOC_Os03g48970.3|12003.m34909|protein External link os SF No hits
  os PF
ENSOGAP00000002361 External link o4 SF No hits
  o4 PF
ENSMLUP00000007528 External link lu SF No hits
  lu PF
ENSMMUP00000027878 External link ru SF No hits
  ru PF
evm.TU.supercontig_20.45 r6 SF No hits
  r6 PF
ENSEEUP00000005907 External link e4 SF No hits
  e4 PF
Afu2g14720 External link ao SF No hits
  ao PF
AT5G12840.3 External link at SF No hits
  at PF
AT3G05690.1 External link ad SF No hits
  ad PF
T08D10.1 External link cn SF No hits
Gene name: CE03642  cn PF
jgi|Poptr1_1|549314|eugene3.00011755 External link pt SF No hits
  pt PF
AC200729.2_FGT015 External link ze SF No hits
  ze PF
jgi|Mycgr1|82075|estExt_fgenesh2_pg.C_11033 External link yo SF No hits
  yo PF
AT1G54160.1 External link at SF No hits
  at PF
AC188134.2_FGT028 External link ze SF No hits
  ze PF
jgi|Emihu1|244194|gm1.41200025 External link ex SF No hits
  ex PF
jgi|Phypa1_1|162379|estExt_fgenesh1_pg.C_420118 External link pw SF No hits
  pw PF
evm.TU.supercontig_104.9 r6 SF No hits
  r6 PF
29706.m001307 External link rk SF No hits
  rk PF
ENSDARP00000061545 External link da SF No hits
  da PF
LOC_Os03g29760.1|12003.m08242|protein External link os SF No hits
  os PF
BDEG_06018 b8 SF No hits
  b8 PF
LOC_Os07g06470.1|12007.m05108|protein External link os SF No hits
  os PF
jgi|Nemve1|82757|e_gw.6.529.1 External link nw SF No hits
  nw PF
CISG_02529 i5 SF No hits
  i5 PF