DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: B3 DNA binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
AC195332.3_FGT028 External link ze SF
  ze PF
jgi|Sorbi1|5062361|Sb01g014480 External link oj SF
  oj PF
AC200562.3_FGT029 External link ze SF
  ze PF
AC208531.1_FGT009 External link ze SF
  ze PF
AC191662.4_FGT028 External link ze SF
  ze PF
jgi|Selmo1|412738|fgenesh2_pg.C_scaffold_18000314 External link gj SF
  gj PF
jgi|Poptr1_1|245007|gw1.XIV.1750.1 External link pt SF
  pt PF
GSVIVP00018838001 vt SF
  vt PF
jgi|Poptr1_1|179921|gw1.I.8521.1 External link pt SF
  pt PF
30068.m002516 External link rk SF
  rk PF
LOC_Os01g70270.2|12001.m43359|protein External link os SF
  os PF
Gm0089x00123 yg SF
  yg PF
jgi|Poptr1_1|409923|gw1.II.1258.1 External link pt SF
  pt PF
jgi|Selmo1|437944|estExt_fgenesh2_pg.C_10526 External link gj SF
  gj PF
Gm0081x00024 yg SF
  yg PF
LOC_Os01g70270.3|12001.m43360|protein External link os SF
  os PF
AC193433.2_FGT017 External link ze SF
  ze PF
AT5G37020.1 External link at SF
  at PF
jgi|Phypa1_1|127229|e_gw1.64.107.1 External link pw SF
  pw PF
Gm0015x00347 yg SF
  yg PF
AT4G23980.1 External link at SF
  at PF
Gm0090x00331 yg SF
  yg PF
29769.m000463 External link rk SF
  rk PF
Gm0136x00145 yg SF
  yg PF
jgi|Phypa1_1|168019|estExt_fgenesh1_pg.C_1630077 External link pw SF
  pw PF
Gm0015x00717 yg SF
  yg PF
GSVIVP00006721001 vt SF
  vt PF
AC203318.2_FGT024 External link ze SF
  ze PF
LOC_Os02g06910.1|12002.m06038|protein External link os SF
  os PF
Gm0040x00159 yg SF
  yg PF
jgi|Selmo1|181406|estExt_Genewise1Plus.C_650169 External link gj SF
  gj PF
GSVIVP00008630001 vt SF
  vt PF
jgi|Poptr1_1|289219|gw1.44.432.1 External link pt SF
  pt PF
LOC_Os01g70270.4|12001.m43358|protein External link os SF
  os PF
Gm0011x00200 yg SF
  yg PF
AC199212.2_FGT014 External link ze SF
  ze PF
evm.TU.supercontig_26.24 r6 SF
  r6 PF
Gm0040x00074 yg SF
  yg PF
LOC_Os01g70270.1|12001.m13075|protein External link os SF
  os PF
30147.m014418 External link rk SF
  rk PF
IMGA|AC151529_18.1 External link mw SF
  mw PF
jgi|Poptr1_1|414037|gw1.III.1140.1 External link pt SF
  pt PF
AT4G23980.2 External link at SF
  at PF
AT5G37020.1 External link ad SF
  ad PF
jgi|Sorbi1|5031057|Sb10g006440 External link oj SF
  oj PF
AT4G23980.1 External link ad SF
  ad PF
jgi|Sorbi1|5045910|Sb09g004140 External link oj SF
  oj PF
29738.m001050 External link rk SF
  rk PF
Gm0301x00006 yg SF
  yg PF
AT1G50680.1 External link at SF
  at PF