DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: No apical meristem (NAM) protein.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
GSVIVP00038745001 vt SF
  vt PF
AC201894.3_FGT013 External link ze SF
  ze PF
AC197067.2_FGT023 External link ze SF
  ze PF
AC194340.3_FGT020 External link ze SF
  ze PF
AC211149.1_FGT010 External link ze SF
  ze PF
AC204510.2_FGT003 External link ze SF
  ze PF
jgi|Poptr1_1|583893|eugene3.01550060 External link pt SF
  pt PF
jgi|Sorbi1|5051047|Sb02g021226 External link oj SF
  oj PF
AT1G64100.2 External link at SF
  at PF
AT1G64100.2 External link ad SF
  ad PF
AC205696.1_FGT015 External link ze SF
  ze PF
Gm0161x00105 yg SF
  yg PF
AP006675_16.1 External link jp SF
  jp PF
AC203047.2_FGT003 External link ze SF
  ze PF
AC199765.3_FGT019 External link ze SF
  ze PF
GSVIVP00016250001 vt SF
  vt PF
AC199317.3_FGT010 External link ze SF
  ze PF
AC201757.2_FGT012 External link ze SF
  ze PF
jgi|Sorbi1|5060532|Sb09g020880 External link oj SF
  oj PF
AT1G19040.1 External link at SF
  at PF
AT1G60280.1 External link at SF
  at PF
AT1G60350.1 External link at SF
  at PF
AT1G19040.1 External link ad SF
  ad PF
AT1G60280.1 External link ad SF
  ad PF
AP006123_14.1 External link jp SF
  jp PF
AT1G60340.1 External link ad SF
  ad PF
AT1G60350.1 External link ad SF
  ad PF
AT1G60300.1 External link at SF
  at PF
Gm0161x00103.2 yg SF
  yg PF
AT1G60340.1 External link at SF
  at PF
AT1G60300.1 External link ad SF
  ad PF
jgi|Sorbi1|5031163|Sb10g007890 External link oj SF
  oj PF
GSVIVP00024591001 vt SF
  vt PF
AT3G10490.2 External link at SF
  at PF
GSVIVP00025716001 vt SF
  vt PF
AC204356.1_FGT006 External link ze SF
  ze PF
LOC_Os04g40140.1|12004.m08997|protein External link os SF
  os PF
AT1G28470.1 External link at SF
  at PF
LOC_Os08g44820.3|12008.m26799|protein External link os SF
  os PF
LOC_Os12g41680.1|12012.m07949|protein External link os SF
  os PF
30076.m004490 External link rk SF
  rk PF
30076.m004477 External link rk SF
  rk PF
AC194453.3_FGT007 External link ze SF
  ze PF
AT4G01520.1 External link ad SF
  ad PF
GSVIVP00000504001 vt SF
  vt PF
Gm0136x00170 yg SF
  yg PF
GSVIVP00027622001 vt SF
  vt PF
AT3G04060.1 External link ad SF
  ad PF
LOC_Os02g36880.1|12002.m08775|protein External link os SF
  os PF
jgi|Poptr1_1|415147|gw1.III.2250.1 External link pt SF
  pt PF