DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Transcription factor WhiB.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|21223607|ref|NP_629386.1| External link sf SF No hits
  sf PF
gi|148272240|ref|YP_001221801.1| External link 32 SF No hits
  32 PF
gi|183983887|ref|YP_001852178.1| External link 8u SF No hits
  8u PF
gi|15610396|ref|NP_217777.1| External link mb SF No hits
  mb PF
gi|111020240|ref|YP_703212.1| External link 3r SF No hits
  3r PF
gi|15828239|ref|NP_302502.1| External link ml SF No hits
  ml PF
gi|62389177|ref|YP_224579.1| External link cb SF No hits
  cb PF
gi|68536817|ref|YP_251522.1| External link jk SF No hits
  jk PF
gi|169630527|ref|YP_001704176.1| External link 8c SF No hits
  8c PF
gi|111023276|ref|YP_706248.1| External link 3r SF No hits
  3r PF
gi|134096929|ref|YP_001102590.1| External link 18 SF No hits
  18 PF
gi|108797038|ref|YP_637235.1| External link yb SF No hits
  yb PF
gi|189440692|ref|YP_001955773.1| External link e6 SF No hits
  e6 PF
gi|108801787|ref|YP_641984.1| External link yb SF No hits
  yb PF
gi|15842849|ref|NP_337886.1| External link mu SF No hits
  mu PF
gi|72162282|ref|YP_289939.1| External link tf SF No hits
  tf PF
gi|134102860|ref|YP_001108521.1| External link 18 SF No hits
  18 PF
gi|15607164|ref|NP_214536.1| External link mb SF No hits
  mb PF
gi|19551530|ref|NP_599532.1| External link c3 SF No hits
  c3 PF
gi|145225490|ref|YP_001136168.1| External link 4h SF No hits
  4h PF
gi|57117070|ref|YP_177940.1| External link mb SF No hits
  mb PF
gi|119961104|ref|YP_948398.1| External link 56 SF No hits
  56 PF
gi|121639149|ref|YP_979373.1| External link 07 SF No hits
  07 PF
gi|119025673|ref|YP_909518.1| External link 5g SF No hits
  5g PF
gi|183981361|ref|YP_001849652.1| External link 8u SF No hits
  8u PF
gi|182436128|ref|YP_001823847.1| External link 7n SF No hits
  7n PF
gi|118615954|ref|YP_904286.1| External link 5o SF No hits
  5o PF
gi|111020219|ref|YP_703191.1| External link 3r SF No hits
  3r PF
gi|118470605|ref|YP_886319.1| External link 3e SF No hits
  3e PF
gi|15842781|ref|NP_337818.1| External link mu SF No hits
  mu PF
gi|184200539|ref|YP_001854746.1| External link 98 SF No hits
  98 PF
gi|183980076|ref|YP_001848367.1| External link 8u SF No hits
  8u PF
gi|148663080|ref|YP_001284603.1| External link 4q SF No hits
  4q PF
gi|118617993|ref|YP_906325.1| External link 5o SF No hits
  5o PF
gi|182436553|ref|YP_001824272.1| External link 7n SF No hits
  7n PF
gi|25027314|ref|NP_737368.1| External link co SF No hits
  co PF
gi|148663544|ref|YP_001285067.1| External link 4q SF No hits
  4q PF
gi|23465577|ref|NP_696180.1| External link bl SF No hits
  bl PF
gi|41406491|ref|NP_959327.1| External link av SF No hits
  av PF
gi|183981153|ref|YP_001849444.1| External link 8u SF No hits
  8u PF
gi|31794373|ref|NP_856866.1| External link mc SF No hits
  mc PF
gi|120405232|ref|YP_955061.1| External link 28 SF No hits
  28 PF
gi|145596249|ref|YP_001160546.1| External link 1h SF No hits
  1h PF
gi|111019608|ref|YP_702580.1| External link 3r SF No hits
  3r PF
gi|86739347|ref|YP_479747.1| External link fk SF No hits
  fk PF
gi|29831585|ref|NP_826219.1| External link s9 SF No hits
  s9 PF
gi|29834056|ref|NP_828690.1| External link s9 SF No hits
  s9 PF
gi|134102033|ref|YP_001107694.1| External link 18 SF No hits
  18 PF
gi|25026839|ref|NP_736893.1| External link co SF No hits
  co PF
gi|19551994|ref|NP_599996.1| External link c3 SF No hits
  c3 PF