DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: MIZ zinc finger.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
AT5G60410.2 External link ad SF
  ad PF
LOC_Os03g50980.1|12003.m10080|protein External link os SF
  os PF
AT5G60410.2 External link at SF
  at PF
jgi|Phypa1_1|165698|estExt_fgenesh1_pg.C_940024 External link pw SF
  pw PF
LOC_Os05g03430.2|12005.m04877|protein External link os SF
  os PF
Gm0112x00254 yg SF
  yg PF
IMGA|AC152176_5.1 External link mw SF
  mw PF
AT5G60410.4 External link at SF
  at PF
PITG_00116 iy SF
  iy PF
LOC_Os05g03430.1|12005.m27681|protein External link os SF
  os PF
AT5G60410.1 External link at SF
  at PF
jgi|Selmo1|93518|e_gw1.14.413.1 External link gj SF
  gj PF
GSVIVP00024500001 vt SF
  vt PF
jgi|Poptr1_1|204260|gw1.IX.4725.1 External link pt SF
  pt PF
jgi|Poptr1_1|294068|gw1.66.741.1 External link pt SF
  pt PF
MAL13P1.302 pl SF
  pl PF
AC187777.3_FGT005 External link ze SF
  ze PF
jgi|Phypa1_1|159935|estExt_fgenesh1_pg.C_160242 External link pw SF
  pw PF
AT5G60410.3 External link at SF
  at PF
AT5G60410.5 External link at SF
  at PF
IMGA|AC150891_19.1 External link mw SF
  mw PF
30111.m000729 External link rk SF
  rk PF
AAEL015099-PD External link ax SF
  ax PF
AAEL015099-PB External link ax SF
  ax PF
gnl|GLV|KLLA0A02189g kl SF
  kl PF
YDR409W External link xs SF
Gene name: SIZ1  xs PF
SPAC1687.05 External link po SF
  po PF
YOR156C External link sc SF
Gene name: NFI1  sc PF
ORFP:5259 y8 SF
  y8 PF
ATEG_05651 gi SF
  gi PF
AAEL015099-PF External link ax SF
  ax PF
ORFP:5377 y1 SF
  y1 PF
AAR121W External link go SF
  go PF
YDR409W External link sc SF
Gene name: SIZ1  sc PF
AN6498.2 an SF
  an PF
SCRG_01548 r5 SF
  r5 PF
jgi|Picst3|28241|fgenesh1_pg.C_chr_1.1000255 External link ip SF
  ip PF
Kwal_18743 External link kw SF
  kw PF
AO090701000011 a8 SF
  a8 PF
A7TT99|A7TT99_VANPO External link vw SF
  vw PF
AFL2G_05670 gq SF
  gq PF
80906.m00327 External link tx SF
  tx PF
A6ZZ08|A6ZZ08_YEAS7 External link yj SF
  yj PF
AAEL015099-PF External link a4 SF
  a4 PF
YOR156C External link xs SF
Gene name: NFI1  xs PF
jgi|Batde5|86581|GP3.021400 External link b9 SF
  b9 PF
PGUG_02830.1 ng SF
  ng PF
FBpp0141960 External link ge SF
  ge PF
ORFP:23848 y1 SF
  y1 PF
FBpp0115149 External link dk SF
  dk PF