DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: BED zinc finger.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
AC196777.3_FGT026 External link ze SF
  ze PF
ACYPI20685-PA External link qp SF
  qp PF
jgi|Sorbi1|5060335|Sb09g016200 External link oj SF
  oj PF
LOC_Os12g27980.1|12012.m06614|protein External link os SF
  os PF
GSVIVP00033958001 vt SF
  vt PF
ACYPI21014-PA External link qp SF
  qp PF
LOC_Os06g40240.1|12006.m08560|protein External link os SF
  os PF
AC199202.2_FGT002 External link ze SF
  ze PF
AC197221.2_FGT015 External link ze SF
  ze PF
gi|221127763|ref|XP_002153820.1| External link qm SF
  qm PF
AC204476.2_FGT007 External link ze SF
  ze PF
jgi|Dappu1|309058|PASA_GEN_0900122 External link d7 SF
  d7 PF
PHUM011277-PA hv SF
  hv PF
gi|221120636|ref|XP_002156314.1| External link qm SF
  qm PF
AC185430.3_FGT005 External link ze SF
  ze PF
PGTG_13779 p4 SF
  p4 PF
AC191361.3_FGT016 External link ze SF
  ze PF
AC193358.3_FGT018 External link ze SF
  ze PF
LOC_Os04g53160.1|12004.m10207|protein External link os SF
  os PF
LOC_Os04g53120.1|12004.m10203|protein External link os SF
  os PF
AC207722.1_FGT029 External link ze SF
  ze PF
gi|156540435|ref|XP_001599720.1| External link nz SF
  nz PF
AC197035.3_FGT016 External link ze SF
  ze PF
AC206688.1_FGT020 External link ze SF
  ze PF
gi|221127298|ref|XP_002163259.1| External link qm SF
  qm PF
GSTENP00021902001 External link t1 SF
  t1 PF
LOC_Os02g15510.1|12002.m06794|protein External link os SF
  os PF
GSTENP00021902001 External link tn SF
  tn PF
gi|156546558|ref|XP_001601034.1| External link nz SF
  nz PF
Y47D3B.9 External link cl SF No hits
Gene name: CE19173  cl PF
ENSCAFP00000016312 External link dg SF No hits
  dg PF
FBpp0285698 External link do SF No hits
  do PF
AC200056.3_FGT018 External link ze SF No hits
  ze PF
FBpp0220927 External link dw SF No hits
  dw PF
LOC_Os07g47800.1|12007.m08995|protein External link os SF No hits
  os PF
FBpp0144567 External link gd SF No hits
  gd PF
ENSMUSP00000105003 External link mm SF No hits
Gene name: Zbed4  mm PF
ENSPPYP00000015162 External link of SF No hits
  of PF
gi|221121038|ref|XP_002155652.1| External link qm SF No hits
  qm PF
LOC_Os04g48780.1|12004.m09813|protein External link os SF No hits
  os PF
AC185623.4_FGT021 External link ze SF No hits
  ze PF
AC191650.3_FGT004 External link ze SF No hits
  ze PF
AC208234.1_FGT015 External link ze SF No hits
  ze PF
ACYPI42913-PA External link qp SF No hits
  qp PF
PGTG_08766 p4 SF No hits
  p4 PF
PHUM009221-PA hv SF No hits
  hv PF
LOC_Os08g23920.1|12008.m06412|protein External link os SF No hits
  os PF
jgi|Poptr1_1|584274|eugene3.01600010 External link pt SF No hits
  pt PF
jgi|Dappu1|331582|NCBI_GNO_16800036 External link d7 SF No hits
  d7 PF
LOC_Os02g55830.1|12002.m10608|protein External link os SF No hits
  os PF