DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: WRKY DNA -binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
IMGA|CR962131_4.1 External link mw SF
  mw PF
IMGA|AC146785_31.1 External link mw SF
  mw PF
jgi|Ost9901_3|93136|ost_08_010_039 External link oz SF
  oz PF
jgi|Sorbi1|5058547|Sb07g006230 External link oj SF
  oj PF
LOC_Os12g01180.1|12012.m04122|protein External link os SF
  os PF
AT5G45050.1 External link at SF
  at PF
AT5G45050.1 External link ad SF
  ad PF
AT5G45260.1 External link at SF
  at PF
AT5G45260.1 External link ad SF
  ad PF
AT4G12020.1 External link at SF
  at PF
jgi|Sorbi1|5051047|Sb02g021226 External link oj SF
  oj PF
AT5G45050.2 External link at SF
  at PF
AT4G12020.2 External link at SF
  at PF
AT4G12020.2 External link ad SF
  ad PF
jgi|Sorbi1|5050796|Sb02g008880 External link oj SF
  oj PF
jgi|Poptr1_1|588876|eugene3.02690004 External link pt SF
  pt PF
AT3G58710.2 External link at SF No hits
  at PF
LOC_Os11g29870.1|12011.m06896|protein External link os SF No hits
  os PF
LOC_Os11g45850.1|12011.m08416|protein External link os SF No hits
  os PF
LOC_Os09g30400.3|12009.m059922|protein External link os SF No hits
  os PF
Gm0049x00129 yg SF No hits
  yg PF
Gm0013x00446 yg SF No hits
  yg PF
GSVIVP00037501001 vt SF No hits
  vt PF
Gm0155x00149 yg SF No hits
  yg PF
jgi|Poptr1_1|744845|estExt_Genewise1_v1.C_1400026 External link pt SF No hits
  pt PF
AC195359.2_FGT018 External link ze SF No hits
  ze PF
LOC_Os01g60490.1|12001.m12177|protein External link os SF No hits
  os PF
AC187811.3_FGT014 External link ze SF No hits
  ze PF
jgi|Sorbi1|5053712|Sb03g034670 External link oj SF No hits
  oj PF
jgi|Sorbi1|5060976|Sb09g028660 External link oj SF No hits
  oj PF
LOC_Os01g43550.2|12001.m42681|protein External link os SF No hits
  os PF
Gm0214x00054 yg SF No hits
  yg PF
jgi|Sorbi1|5036276|Sb03g028440 External link oj SF No hits
  oj PF
Gm0021x00310 yg SF No hits
  yg PF
LOC_Os08g38990.3|12008.m26522|protein External link os SF No hits
  os PF
AT1G66550.1 External link ad SF No hits
  ad PF
jgi|Poptr1_1|281810|gw1.28.384.1 External link pt SF No hits
  pt PF
AT1G69810.1 External link at SF No hits
  at PF
29848.m004544 External link rk SF No hits
  rk PF
AT1G62300.1 External link ad SF No hits
  ad PF
Gm0009x00193 yg SF No hits
  yg PF
IMGA|CR932960_36.1 External link mw SF No hits
  mw PF
evm.TU.supercontig_684.1 r6 SF No hits
  r6 PF
AT4G23810.1 External link at SF No hits
  at PF
IMGA|CR955006_21.1 External link mw SF No hits
  mw PF
AC191689.4_FGT026 External link ze SF No hits
  ze PF
AT5G15130.1 External link at SF No hits
  at PF
jgi|Selmo1|29247|gw1.19.327.1 External link gj SF No hits
  gj PF
AT4G11070.1 External link ad SF No hits
  ad PF
Gm0022x00733 yg SF No hits
  yg PF