DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: SART-1 family.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|115925867|ref|XP_001179760.1| External link tu SF
  tu PF
jgi|Emihu1|450265|estExtDG_Genemark1.C_240115 External link ex SF
  ex PF
jgi|Emihu1|459524|estExtDG_Genemark1.C_5280009 External link ex SF
  ex PF
HCAG_06101.1 hk SF
  hk PF
CC1G_07074.1 or SF No hits
  or PF
ENSPTRP00000006733 External link xq SF No hits
  xq PF
gnl|GLV|KLLA0F08591g kl SF No hits
  kl PF
F19F10.9 External link cn SF No hits
Gene name: CE27372  cn PF
FBpp0280711 External link do SF No hits
  do PF
est_fge1_pg_C_170088 a5 SF No hits
  a5 PF
PITG_09598 iy SF No hits
  iy PF
jgi|Dappu1|306089|PASA_GEN_4500020 External link d7 SF No hits
  d7 PF
ORFP:24017 y1 SF No hits
  y1 PF
jgi|Dappu1|306323|PASA_GEN_4900015 External link d7 SF No hits
  d7 PF
SS1G_10614.1 lz SF No hits
  lz PF
jgi|ChlNC64A_1|49703|fgenesh3_pg.C_scaffold_1000401 External link h2 SF No hits
  h2 PF
106080 External link tl SF No hits
  tl PF
GSTENP00013713001 External link t1 SF No hits
  t1 PF
evm.TU.supercontig_115.47 r6 SF No hits
  r6 PF
AT5G16780.1 External link at SF No hits
  at PF
ENSTBEP00000009415 External link tz SF No hits
  tz PF
CISG_01702 i5 SF No hits
  i5 PF
CLUG_05331 iu SF No hits
  iu PF
UREG_05145.1 ur SF No hits
  ur PF
AT3G14700.1 External link ad SF No hits
  ad PF
AAEL014540-PA External link a4 SF No hits
  a4 PF
CIRG_08344 i4 SF No hits
  i4 PF
jgi|Nemve1|244988|estExt_fgenesh1_pg.C_1410033 External link nw SF No hits
  nw PF
ENSP00000310448 External link ht SF No hits
Gene name: SART1  ht PF
88.m00092 External link hy SF No hits
  hy PF
jgi|Selmo1|412142|fgenesh2_pg.C_scaffold_17000095 External link gj SF No hits
  gj PF
FBpp0231887 External link du SF No hits
  du PF
CIMG_09075 im SF No hits
  im PF
FBpp0088537 External link dd SF No hits
  dd PF
PB000868.00.0 External link fb SF No hits
  fb PF
jgi|Sporo1|29514|fgenesh1_pg.C_scaffold_12000153 External link yu SF No hits
  yu PF
FG06279.1 fg SF No hits
  fg PF
LOC_Os02g30730.4|12002.m33697|protein External link os SF No hits
  os PF
gi|115629887|ref|XP_001201995.1| External link tu SF No hits
  tu PF
ENSMICP00000002732 External link io SF No hits
  io PF
TA10440 External link nu SF No hits
  nu PF
ENSMMUP00000010570 External link r2 SF No hits
  r2 PF
AAEL010600-PA External link ax SF No hits
  ax PF
FBpp0207961 External link dz SF No hits
  dz PF
scaffold_6703.1 External link nk SF No hits
  nk PF
ENSDARP00000002453 External link da SF No hits
  da PF
GSPATP00013669001 External link ir SF No hits
  ir PF
gnl|GLV|CAGL0I09768g gl SF No hits
  gl PF
ENSCSAVP00000015881 External link c0 SF No hits
  c0 PF
gi|115925861|ref|XP_001179622.1| External link tu SF No hits
  tu PF