DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Transcriptional regulator PadR-like family.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|14591203|ref|NP_143279.1| External link ph SF
  ph PF
gi|154151031|ref|YP_001404649.1| External link 3p SF
  3p PF
gi|154151071|ref|YP_001404689.1| External link 3p SF
  3p PF
gi|37523028|ref|NP_926405.1| External link gv SF
  gv PF
gi|108799261|ref|YP_639458.1| External link yb SF
  yb PF
gi|126434919|ref|YP_001070610.1| External link 22 SF
  22 PF
gi|119868377|ref|YP_938329.1| External link 46 SF
  46 PF
gi|163938947|ref|YP_001643831.1| External link 62 SF
  62 PF
gi|29827832|ref|NP_822466.1| External link s9 SF
  s9 PF
gi|157148655|ref|YP_001455974.1| External link 5x SF
  5x PF
gi|52143589|ref|YP_083240.1| External link x5 SF
  x5 PF
gi|116624297|ref|YP_826453.1| External link 25 SF
  25 PF
gi|124382866|ref|YP_001024208.1| External link 38 SF
  38 PF
gi|161507930|ref|YP_001577894.1| External link 79 SF
  79 PF
gi|15674041|ref|NP_268216.1| External link ll SF
  ll PF
gi|163941743|ref|YP_001646627.1| External link 62 SF
  62 PF
gi|153946904|ref|YP_001399889.1| External link 06 SF
  06 PF
gi|162146714|ref|YP_001601173.1| External link 7c SF
  7c PF
gi|94314668|ref|YP_587877.1| External link r4 SF
  r4 PF
gi|118619439|ref|YP_907771.1| External link 5o SF
  5o PF
gi|82752270|ref|YP_418011.1| External link sk SF
  sk PF
gi|94993356|ref|YP_601455.1| External link pp SF
  pp PF
gi|119960562|ref|YP_947997.1| External link 56 SF
  56 PF
gi|152965001|ref|YP_001360785.1| External link 58 SF
  58 PF
gi|138895063|ref|YP_001125516.1| External link 1u SF
  1u PF
gi|15902741|ref|NP_358291.1| External link st SF
  st PF
gi|158317756|ref|YP_001510264.1| External link 6p SF
  6p PF
gi|172059188|ref|YP_001806840.1| External link 85 SF
  85 PF
gi|194442774|ref|YP_002042481.1| External link 8y SF
  8y PF
gi|170018678|ref|YP_001723632.1| External link 9d SF
  9d PF
gi|152967453|ref|YP_001363237.1| External link 58 SF
  58 PF
gi|134046533|ref|YP_001098018.1| External link 0o SF
  0o PF
gi|55377325|ref|YP_135175.1| External link hm SF
  hm PF
gi|91772660|ref|YP_565352.1| External link m9 SF
  m9 PF
gi|72160967|ref|YP_288624.1| External link tf SF
  tf PF
gi|150399916|ref|YP_001323683.1| External link 57 SF
  57 PF
gi|16127199|ref|NP_421763.1| External link cc SF
  cc PF
gi|15897019|ref|NP_341624.1| External link ss SF
  ss PF
gi|47527923|ref|YP_019272.1| External link b2 SF
  b2 PF
gi|83716422|ref|YP_438226.1| External link b5 SF
  b5 PF
gi|146307253|ref|YP_001187718.1| External link 4y SF
  4y PF
gi|157151306|ref|YP_001449374.1| External link 6s SF
  6s PF
gi|121597833|ref|YP_990773.1| External link 1m SF
  1m PF
gi|37681205|ref|NP_935814.1| External link vb SF
  vb PF
gi|116513011|ref|YP_811918.1| External link 4o SF
  4o PF
gi|16802641|ref|NP_464126.1| External link lm SF
  lm PF
gi|42783130|ref|NP_980377.1| External link bx SF
  bx PF
gi|107022417|ref|YP_620744.1| External link b6 SF
  b6 PF
gi|147669622|ref|YP_001214440.1| External link 10 SF
  10 PF
gi|116620883|ref|YP_823039.1| External link 25 SF
  25 PF