DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: PspC domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|111023168|ref|YP_706140.1| External link 3r SF
  3r PF
gi|172039772|ref|YP_001799486.1| External link 7h SF
  7h PF
gi|116671545|ref|YP_832478.1| External link 1f SF
  1f PF
gi|72162982|ref|YP_290639.1| External link tf SF
  tf PF
gi|119025389|ref|YP_909234.1| External link 5g SF
  5g PF
gi|169630794|ref|YP_001704443.1| External link 8c SF
  8c PF
gi|119717829|ref|YP_924794.1| External link 0j SF
  0j PF
gi|25027175|ref|NP_737229.1| External link co SF
  co PF
gi|21223169|ref|NP_628948.1| External link sf SF
  sf PF
gi|62389502|ref|YP_224904.1| External link cb SF
  cb PF
gi|134103125|ref|YP_001108786.1| External link 18 SF
  18 PF
gi|23466194|ref|NP_696797.1| External link bl SF
  bl PF
gi|189440632|ref|YP_001955713.1| External link e6 SF
  e6 PF
gi|29830014|ref|NP_824648.1| External link s9 SF
  s9 PF
gi|182436532|ref|YP_001824251.1| External link 7n SF
  7n PF
gi|119961150|ref|YP_948679.1| External link 56 SF
  56 PF
gi|159039734|ref|YP_001538987.1| External link 61 SF
  61 PF
gi|152964248|ref|YP_001360032.1| External link 58 SF
  58 PF
gi|145596337|ref|YP_001160634.1| External link 1h SF
  1h PF
gi|38233206|ref|NP_938973.1| External link cd SF
  cd PF
gi|30062826|ref|NP_836997.1| External link fs SF No hits
  fs PF
gi|117623560|ref|YP_852473.1| External link 1j SF No hits
  1j PF
gi|119776185|ref|YP_928925.1| External link 2p SF No hits
  2p PF
gi|182683857|ref|YP_001835604.1| External link 86 SF No hits
  86 PF
gi|194737022|ref|YP_002114717.1| External link d8 SF No hits
  d8 PF
gi|59713496|ref|YP_206271.1| External link vf SF No hits
  vf PF
gi|56551961|ref|YP_162800.1| External link zm SF No hits
  zm PF
gi|57640086|ref|YP_182564.1| External link tk SF No hits
  tk PF
gi|161507934|ref|YP_001577898.1| External link 79 SF No hits
  79 PF
gi|15674670|ref|NP_268844.1| External link x2 SF No hits
  x2 PF
gi|160879422|ref|YP_001558390.1| External link 5z SF No hits
  5z PF
gi|127511355|ref|YP_001092552.1| External link 1r SF No hits
  1r PF
gi|28896356|ref|NP_802706.1| External link s8 SF No hits
  s8 PF
gi|23466195|ref|NP_696798.1| External link bl SF No hits
  bl PF
gi|156974161|ref|YP_001445068.1| External link 65 SF No hits
  65 PF
gi|182413849|ref|YP_001818915.1| External link 8i SF No hits
  8i PF
gi|170684285|ref|YP_001743870.1| External link 9t SF No hits
  9t PF
gi|62390060|ref|YP_225462.1| External link cb SF No hits
  cb PF
gi|54022867|ref|YP_117109.1| External link nf SF No hits
  nf PF
gi|55822635|ref|YP_141076.1| External link x1 SF No hits
  x1 PF
gi|189502405|ref|YP_001958122.1| External link f6 SF No hits
  f6 PF
gi|159901182|ref|YP_001547429.1| External link 5u SF No hits
  5u PF
gi|91210599|ref|YP_540585.1| External link e2 SF No hits
  e2 PF
gi|54022838|ref|YP_117080.1| External link nf SF No hits
  nf PF
gi|24379215|ref|NP_721170.1| External link s6 SF No hits
  s6 PF
gi|170016365|ref|YP_001727284.1| External link 7x SF No hits
  7x PF
gi|86160079|ref|YP_466864.1| External link ae SF No hits
  ae PF
gi|21223277|ref|NP_629056.1| External link sf SF No hits
  sf PF
gi|148543603|ref|YP_001270973.1| External link 49 SF No hits
  49 PF
gi|148555847|ref|YP_001263429.1| External link 2i SF No hits
  2i PF