DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Invasion gene expression up-regulator, SirB.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|77165842|ref|YP_344367.1| External link nr SF No hits
  nr PF
gi|154251461|ref|YP_001412285.1| External link 1e SF No hits
  1e PF
gi|119899373|ref|YP_934586.1| External link 0q SF No hits
  0q PF
gi|113971500|ref|YP_735293.1| External link 0f SF No hits
  0f PF
gi|170024408|ref|YP_001720913.1| External link 8r SF No hits
  8r PF
gi|16129176|ref|NP_415731.1| External link ec SF No hits
  ec PF
gi|29141574|ref|NP_804916.1| External link es SF No hits
  es PF
gi|117919224|ref|YP_868416.1| External link 41 SF No hits
  41 PF
gi|146291911|ref|YP_001182335.1| External link 2a SF No hits
  2a PF
gi|110805218|ref|YP_688738.1| External link 3s SF No hits
  3s PF
gi|121604237|ref|YP_981566.1| External link 01 SF No hits
  01 PF
gi|161613730|ref|YP_001587695.1| External link 78 SF No hits
  78 PF
gi|152970779|ref|YP_001335888.1| External link 2k SF No hits
  2k PF
gi|134094654|ref|YP_001099729.1| External link 5e SF No hits
  5e PF
gi|146311981|ref|YP_001177055.1| External link 08 SF No hits
  08 PF
gi|161503114|ref|YP_001570226.1| External link 70 SF No hits
  70 PF
gi|37679117|ref|NP_933726.1| External link vb SF No hits
  vb PF
gi|156973551|ref|YP_001444458.1| External link 65 SF No hits
  65 PF
gi|147675215|ref|YP_001217693.1| External link 15 SF No hits
  15 PF
gi|153948495|ref|YP_001401037.1| External link 06 SF No hits
  06 PF
gi|170080841|ref|YP_001730161.1| External link 8n SF No hits
  8n PF
gi|62180338|ref|YP_216755.1| External link x6 SF No hits
  x6 PF
gi|16765115|ref|NP_460730.1| External link su SF No hits
Gene name: sirC  su PF
gi|153002118|ref|YP_001367799.1| External link 1a SF No hits
  1a PF
gi|170020420|ref|YP_001725374.1| External link 9d SF No hits
  9d PF
gi|15642176|ref|NP_231808.1| External link vc SF No hits
  vc PF
gi|108807399|ref|YP_651315.1| External link ys SF No hits
  ys PF
gi|74316962|ref|YP_314702.1| External link nt SF No hits
  nt PF
gi|24375320|ref|NP_719363.1| External link sl SF No hits
  sl PF
gi|148825846|ref|YP_001290599.1| External link 4f SF No hits
  4f PF
gi|16760667|ref|NP_456284.1| External link si SF No hits
  si PF
gi|145298195|ref|YP_001141036.1| External link 44 SF No hits
  44 PF
gi|124266882|ref|YP_001020886.1| External link 14 SF No hits
  14 PF
gi|114319258|ref|YP_740941.1| External link 5r SF No hits
  5r PF
gi|30249470|ref|NP_841540.1| External link ne SF No hits
  ne PF
gi|167625121|ref|YP_001675415.1| External link 8l SF No hits
  8l PF
gi|54309992|ref|YP_131012.1| External link he SF No hits
  he PF
gi|15830972|ref|NP_309745.1| External link eo SF No hits
  eo PF
gi|15793916|ref|NP_283738.1| External link nn SF No hits
  nn PF
gi|68250215|ref|YP_249327.1| External link hf SF No hits
  hf PF
gi|90021109|ref|YP_526936.1| External link d0 SF No hits
  d0 PF
gi|127513835|ref|YP_001095032.1| External link 1r SF No hits
  1r PF
gi|190150043|ref|YP_001968568.1| External link d9 SF No hits
  d9 PF
gi|152979331|ref|YP_001344960.1| External link 4k SF No hits
  4k PF
gi|51596333|ref|YP_070524.1| External link yr SF No hits
  yr PF
gi|16760667|ref|NP_456284.1| External link ty SF No hits
  ty PF
gi|45441671|ref|NP_993210.1| External link ye SF No hits
  ye PF
gi|74312447|ref|YP_310866.1| External link on SF No hits
  on PF
gi|22126173|ref|NP_669596.1| External link yk SF No hits
  yk PF
gi|126172948|ref|YP_001049097.1| External link 2z SF No hits
  2z PF