DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: LytTr DNA-binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|114320715|ref|YP_742398.1| External link 5r SF
  5r PF
gi|91783672|ref|YP_558878.1| External link b4 SF
  b4 PF
gi|148262698|ref|YP_001229404.1| External link 3g SF
  3g PF
gi|83310685|ref|YP_420949.1| External link m5 SF
  m5 PF
gi|91780098|ref|YP_555305.1| External link b4 SF
  b4 PF
gi|158425899|ref|YP_001527191.1| External link 75 SF
  75 PF
gi|83594844|ref|YP_428596.1| External link rb SF
  rb PF
gi|77917674|ref|YP_355489.1| External link p8 SF
  p8 PF
gi|118579919|ref|YP_901169.1| External link 3c SF
  3c PF
gi|39997197|ref|NP_953148.1| External link gs SF
  gs PF
gi|154246483|ref|YP_001417441.1| External link 2d SF
  2d PF
gi|163854319|ref|YP_001628617.1| External link 5y SF
  5y PF
gi|153010683|ref|YP_001371897.1| External link 40 SF
  40 PF
PFE0355c pl SF
  pl PF
gi|30023318|ref|NP_834949.1| External link bc SF
  bc PF
gi|15616456|ref|NP_244762.1| External link bh SF
  bh PF
gi|160881719|ref|YP_001560687.1| External link 5z SF
  5z PF
gi|28378083|ref|NP_784975.1| External link lb SF
  lb PF
gi|42784455|ref|NP_981702.1| External link bx SF
  bx PF
gi|163942973|ref|YP_001647857.1| External link 62 SF
  62 PF
gi|52140276|ref|YP_086554.1| External link x5 SF
  x5 PF
gi|51891832|ref|YP_074523.1| External link sb SF
  sb PF
gi|148378627|ref|YP_001253168.1| External link 0i SF
  0i PF
gi|56962196|ref|YP_173919.1| External link x4 SF
  x4 PF
gi|51891686|ref|YP_074377.1| External link sb SF
  sb PF
gi|169826373|ref|YP_001696531.1| External link 7z SF
  7z PF
gi|23097701|ref|NP_691167.1| External link oi SF
  oi PF
gi|23097932|ref|NP_691398.1| External link oi SF
  oi PF
gi|170757477|ref|YP_001780263.1| External link 8f SF
  8f PF
gi|153931065|ref|YP_001383014.1| External link 3t SF
  3t PF
gi|118480328|ref|YP_897479.1| External link 31 SF
  31 PF
gi|152977472|ref|YP_001376989.1| External link 0w SF
  0w PF
gi|153936646|ref|YP_001386561.1| External link 2u SF
  2u PF
gi|49478952|ref|YP_039276.1| External link ko SF
  ko PF
gi|90023540|ref|YP_529367.1| External link d0 SF
  d0 PF
gi|167039159|ref|YP_001662144.1| External link 8d SF
  8d PF
gi|116620254|ref|YP_822410.1| External link 25 SF
  25 PF
gi|78044195|ref|YP_359513.1| External link c9 SF
  c9 PF
gi|116623395|ref|YP_825551.1| External link 25 SF
  25 PF
gi|146298557|ref|YP_001193148.1| External link 1z SF
  1z PF
gi|126700221|ref|YP_001089118.1| External link 3x SF
  3x PF
gi|18309500|ref|NP_561434.1| External link cu SF
  cu PF
gi|71280223|ref|YP_268998.1| External link lw SF
  lw PF
gi|150389188|ref|YP_001319237.1| External link 0n SF
  0n PF
gi|154687024|ref|YP_001422185.1| External link 2o SF
  2o PF
gi|21281966|ref|NP_645052.1| External link s1 SF
  s1 PF
gi|126700874|ref|YP_001089771.1| External link 3x SF
  3x PF
gi|21219730|ref|NP_625509.1| External link sf SF
  sf PF
gi|156973303|ref|YP_001444210.1| External link 65 SF
  65 PF
gi|153000185|ref|YP_001365866.1| External link 1a SF
  1a PF