DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: DNA binding protein S1FA.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
IMGA|AC124963_25.1 External link mw SF
  mw PF
AT2G37120.1 External link ad SF No hits
  ad PF
Gm0176x00054 yg SF No hits
  yg PF
AT3G09735.1 External link ad SF No hits
  ad PF
LOC_Os04g33440.1|12004.m08436|protein External link os SF No hits
  os PF
AC205839.1_FGT032 External link ze SF No hits
  ze PF
IMGA|AC124963_29.1 External link mw SF No hits
  mw PF
GSVIVP00024502001 vt SF No hits
  vt PF
jgi|Poptr1_1|675985|grail3.0028014001 External link pt SF No hits
  pt PF
IMGA|AC124963_24.1 External link mw SF No hits
  mw PF
AT3G53370.1 External link at SF No hits
  at PF
LOC_Os04g33440.3|12004.m35301|protein External link os SF No hits
  os PF
29805.m001471 External link rk SF No hits
  rk PF
AC198394.2_FGT021 External link ze SF No hits
  ze PF
AT3G09735.1 External link at SF No hits
  at PF
Gm0041x00016 yg SF No hits
  yg PF
LOC_Os04g33420.1|12004.m08438|protein External link os SF No hits
  os PF
LOC_Os04g33440.2|12004.m35300|protein External link os SF No hits
  os PF
AT2G37120.1 External link at SF No hits
  at PF
AT3G53370.1 External link ad SF No hits
  ad PF
Gm0201x00005 yg SF No hits
  yg PF
evm.TU.supercontig_638.2 r6 SF No hits
  r6 PF
jgi|Poptr1_1|576667|eugene3.00160802 External link pt SF No hits
  pt PF
GSVIVP00023165001 vt SF No hits
  vt PF
Gm0063x00267 yg SF No hits
  yg PF