DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: YABBY protein.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
Gm0069x00166 yg SF
  yg PF
jgi|Poptr1_1|835982|estExt_fgenesh4_pm.C_LG_XVIII0409 External link pt SF
  pt PF
Gm0192x00029 yg SF
  yg PF
IMGA|AC155228_9.1 External link mw SF
  mw PF
AT4G00180.2 External link at SF
  at PF
GSVIVP00017462001 vt SF
  vt PF
IMGA|AC133862_16.1 External link mw SF
  mw PF
AT1G08465.1 External link ad SF
  ad PF
AT1G69180.1 External link at SF
  at PF
jgi|Poptr1_1|181158|gw1.I.9758.1 External link pt SF
  pt PF
LOC_Os02g42950.2|12002.m33795|protein External link os SF
  os PF
AC205903.1_FGT021 External link ze SF
  ze PF
GSVIVP00003512001 vt SF
  vt PF
jgi|Poptr1_1|765849|fgenesh4_pg.C_LG_VIII000863 External link pt SF
  pt PF
AC195538.2_FGT021 External link ze SF
  ze PF
Gm0219x00047 yg SF
  yg PF
AC212974.1_FGT032 External link ze SF
  ze PF
Gm0110x00131.3 yg SF
  yg PF
AT1G69180.1 External link ad SF
  ad PF
LOC_Os03g44710.1|12003.m09509|protein External link os SF
  os PF
30174.m008839 External link rk SF
  rk PF
BDEG_04388 b8 SF
  b8 PF
jgi|Poptr1_1|256198|gw1.XVI.2137.1 External link pt SF
  pt PF
Gm0132x00064 yg SF
  yg PF
jgi|Poptr1_1|652803|grail3.0023002901 External link pt SF
  pt PF
AT1G08465.1 External link at SF
  at PF
evm.TU.supercontig_145.3 r6 SF
  r6 PF
AT2G26580.1 External link ad SF
  ad PF
LOC_Os03g44710.2|12003.m101419|protein External link os SF
  os PF
evm.TU.supercontig_104.5 r6 SF
  r6 PF
Gm0082x00181.1 yg SF
  yg PF
jgi|Poptr1_1|566056|eugene3.00100614 External link pt SF
  pt PF
AT2G45190.1 External link at SF
  at PF
AP006629_7.1 External link jp SF
  jp PF
AT2G26580.1 External link at SF
  at PF
AC202449.3_FGT017 External link ze SF
  ze PF
AT1G23420.1 External link at SF
  at PF
GSVIVP00026383001 vt SF
  vt PF
GSVIVP00007291001 vt SF
  vt PF
AT2G45190.1 External link ad SF
  ad PF
IMGA|AC124957_5.1 External link mw SF
  mw PF
LOC_Os12g42610.1|12012.m08040|protein External link os SF
  os PF
GSVIVP00002745001 vt SF
  vt PF
29854.m001136 External link rk SF
  rk PF
evm.TU.supercontig_29.121 r6 SF
  r6 PF
evm.TU.contig_30608.1 r6 SF
  r6 PF
AT1G23420.1 External link ad SF
  ad PF
jgi|Poptr1_1|646464|grail3.0018017701 External link pt SF
  pt PF
GSVIVP00030010001 vt SF
  vt PF
Gm0082x00181.2 yg SF
  yg PF