DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: HTH DNA binding domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|15595116|ref|NP_212905.1| External link bb SF
  bb PF
gi|78042626|ref|YP_359015.1| External link c9 SF
  c9 PF
gi|111115602|ref|YP_710220.1| External link 04 SF
  04 PF
gi|55378535|ref|YP_136385.1| External link hm SF
  hm PF
gi|15921893|ref|NP_377562.1| External link sv SF
  sv PF
gi|15899806|ref|NP_344411.1| External link ss SF
  ss PF
gi|159042167|ref|YP_001541419.1| External link 6n SF
  6n PF
gi|76803193|ref|YP_331288.1| External link np SF
  np PF
gi|55379787|ref|YP_137637.1| External link hm SF
  hm PF
gi|169235836|ref|YP_001689036.1| External link 8m SF
  8m PF
gi|15790109|ref|NP_279933.1| External link hb SF
  hb PF
gi|110667694|ref|YP_657505.1| External link 1w SF
  1w PF
gi|55378451|ref|YP_136301.1| External link hm SF
  hm PF
gi|55378431|ref|YP_136281.1| External link hm SF
  hm PF
gi|55376960|ref|YP_134810.1| External link hm SF
  hm PF
gi|15789474|ref|NP_279298.1| External link hb SF
  hb PF
gi|76802836|ref|YP_330931.1| External link np SF
  np PF
gi|55378780|ref|YP_136630.1| External link hm SF
  hm PF
gi|169235189|ref|YP_001688389.1| External link 8m SF
  8m PF
gi|110667060|ref|YP_656871.1| External link 1w SF
  1w PF
gi|76800979|ref|YP_325987.1| External link np SF
  np PF
gi|169236201|ref|YP_001689401.1| External link 8m SF
  8m PF
gi|15790465|ref|NP_280289.1| External link hb SF
  hb PF
gi|110668651|ref|YP_658462.1| External link 1w SF
  1w PF
gi|145591864|ref|YP_001153866.1| External link 5a SF
  5a PF
gi|119872046|ref|YP_930053.1| External link 34 SF
  34 PF
gi|159041447|ref|YP_001540699.1| External link 6n SF
  6n PF
gi|171186065|ref|YP_001794984.1| External link 8h SF
  8h PF
gi|18314187|ref|NP_560854.1| External link pc SF
  pc PF
gi|126460526|ref|YP_001056804.1| External link 4u SF
  4u PF
gi|150015349|ref|YP_001307603.1| External link 03 SF
  03 PF
gi|15899376|ref|NP_343981.1| External link ss SF
  ss PF
ENSORLP00000011225 External link ol SF
  ol PF
ENSORLP00000011225 External link o1 SF
  o1 PF
gi|55379134|ref|YP_136984.1| External link hm SF No hits
  hm PF
gi|159040873|ref|YP_001540125.1| External link 6n SF No hits
  6n PF
gi|169235148|ref|YP_001688348.1| External link 8m SF No hits
  8m PF
gi|16082236|ref|NP_394687.1| External link ta SF No hits
  ta PF
gi|159042376|ref|YP_001541628.1| External link 6n SF No hits
  6n PF
gi|76802039|ref|YP_327047.1| External link np SF No hits
  np PF
gi|170290396|ref|YP_001737212.1| External link 7v SF No hits
  7v PF
gi|159041352|ref|YP_001540604.1| External link 6n SF No hits
  6n PF
gi|146304536|ref|YP_001191852.1| External link 02 SF No hits
  02 PF
gi|76802777|ref|YP_330872.1| External link np SF No hits
  np PF
gi|76802851|ref|YP_330946.1| External link np SF No hits
  np PF
gi|70607892|ref|YP_256762.1| External link za SF No hits
  za PF
gi|55379527|ref|YP_137377.1| External link hm SF No hits
  hm PF
gi|169235185|ref|YP_001688385.1| External link 8m SF No hits
  8m PF
gi|55380297|ref|YP_138146.1| External link hm SF No hits
  hm PF
gi|55377275|ref|YP_135125.1| External link hm SF No hits
  hm PF