DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Mga helix-turn-helix domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|16799990|ref|NP_470258.1| External link li SF
  li PF
gi|51892088|ref|YP_074779.1| External link sb SF
  sb PF
gi|16802959|ref|NP_464444.1| External link lm SF
  lm PF
gi|56962263|ref|YP_173987.1| External link x4 SF
  x4 PF
gi|188535042|ref|YP_001908839.1| External link ej SF
  ej PF
gi|116874017|ref|YP_850798.1| External link 2g SF
  2g PF
gi|82751754|ref|YP_417495.1| External link sk SF
  sk PF
gi|42782040|ref|NP_979287.1| External link bx SF
  bx PF
gi|157694253|ref|YP_001488715.1| External link 6f SF
  6f PF
gi|70725235|ref|YP_252149.1| External link zh SF
  zh PF
gi|46908824|ref|YP_015213.1| External link la SF
  la PF
gi|156932477|ref|YP_001436393.1| External link 69 SF
  69 PF
gi|146319730|ref|YP_001199442.1| External link 4r SF
  4r PF
gi|59713117|ref|YP_205893.1| External link vf SF
  vf PF
gi|126700751|ref|YP_001089648.1| External link 3x SF
  3x PF
gi|152973114|ref|YP_001338260.1| External link 2k SF
  2k PF
gi|126697706|ref|YP_001086603.1| External link 3x SF
  3x PF
gi|29375043|ref|NP_814196.1| External link ef SF
  ef PF
gi|116494015|ref|YP_805749.1| External link 1o SF
  1o PF
gi|46908334|ref|YP_014723.1| External link la SF
  la PF
gi|191637336|ref|YP_001986502.1| External link 95 SF
  95 PF
gi|16804138|ref|NP_465623.1| External link lm SF
  lm PF
gi|116872017|ref|YP_848798.1| External link 2g SF
  2g PF
gi|16802672|ref|NP_464157.1| External link lm SF
  lm PF
gi|117617917|ref|YP_858357.1| External link 33 SF
  33 PF
gi|26553899|ref|NP_757833.1| External link me SF
  me PF
gi|16801268|ref|NP_471536.1| External link li SF
  li PF
gi|150392709|ref|YP_001315384.1| External link 1i SF
  1i PF
gi|88194021|ref|YP_498808.1| External link aq SF
  aq PF
gi|156978574|ref|YP_001440833.1| External link 71 SF
  71 PF
gi|16801862|ref|NP_472130.1| External link li SF
  li PF
gi|161508506|ref|YP_001574165.1| External link 6o SF
  6o PF
gi|151220391|ref|YP_001331214.1| External link 5p SF
  5p PF
gi|15923234|ref|NP_370768.1| External link sa SF
  sa PF
gi|57652503|ref|YP_185124.1| External link x8 SF
  x8 PF
gi|157372605|ref|YP_001480594.1| External link 7e SF
  7e PF
gi|148266669|ref|YP_001245612.1| External link 2c SF
  2c PF
gi|116871765|ref|YP_848546.1| External link 2g SF
  2g PF
gi|16804689|ref|NP_466174.1| External link lm SF
  lm PF
gi|116873536|ref|YP_850317.1| External link 2g SF
  2g PF
gi|49485122|ref|YP_042343.1| External link ar SF
  ar PF
gi|46907106|ref|YP_013495.1| External link la SF
  la PF
gi|16802914|ref|NP_464399.1| External link lm SF
  lm PF
gi|16799945|ref|NP_470213.1| External link li SF
  li PF
gi|87160578|ref|YP_492952.1| External link a2 SF
  a2 PF
gi|15925947|ref|NP_373480.1| External link s2 SF
  s2 PF
gi|126700174|ref|YP_001089071.1| External link 3x SF
  3x PF
gi|21281949|ref|NP_645035.1| External link s1 SF
  s1 PF
gi|123443958|ref|YP_001007928.1| External link 1g SF
  1g PF
gi|15612756|ref|NP_241059.1| External link bh SF
  bh PF