DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Flagellar transcriptional activator (FlhC).

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|171057691|ref|YP_001790040.1| External link 7i SF No hits
  7i PF
gi|33592170|ref|NP_879814.1| External link be SF No hits
  be PF
gi|91779239|ref|YP_554447.1| External link b4 SF No hits
  b4 PF
gi|16129843|ref|NP_416405.1| External link ec SF No hits
Gene name: flhC  ec PF
gi|163856409|ref|YP_001630707.1| External link 5y SF No hits
  5y PF
gi|74311759|ref|YP_310178.1| External link on SF No hits
  on PF
gi|89108731|ref|AP_002511.1| External link ew SF No hits
  ew PF
gi|26248158|ref|NP_754198.1| External link e0 SF No hits
  e0 PF
gi|171056843|ref|YP_001789192.1| External link 7i SF No hits
  7i PF
gi|33596122|ref|NP_883765.1| External link bp SF No hits
  bp PF
gi|187478165|ref|YP_786189.1| External link 9k SF No hits
  9k PF
gi|119897738|ref|YP_932951.1| External link 0q SF No hits
  0q PF
gi|170731589|ref|YP_001763536.1| External link 7j SF No hits
  7j PF
gi|94310631|ref|YP_583841.1| External link r4 SF No hits
  r4 PF
gi|108807853|ref|YP_651769.1| External link ys SF No hits
  ys PF
gi|188533098|ref|YP_001906895.1| External link ej SF No hits
  ej PF
gi|16121927|ref|NP_405240.1| External link yp SF No hits
  yp PF
gi|82702435|ref|YP_412001.1| External link nl SF No hits
  nl PF
gi|152982540|ref|YP_001353791.1| External link 4d SF No hits
  4d PF
gi|110642007|ref|YP_669737.1| External link 0m SF No hits
  0m PF
gi|116688276|ref|YP_833899.1| External link 5l SF No hits
  5l PF
gi|157145317|ref|YP_001452636.1| External link 5x SF No hits
  5x PF
gi|170681713|ref|YP_001743351.1| External link 9t SF No hits
  9t PF
gi|186895793|ref|YP_001872905.1| External link 9g SF No hits
  9g PF
gi|50120620|ref|YP_049787.1| External link er SF No hits
  er PF
gi|73539427|ref|YP_299794.1| External link rl SF No hits
  rl PF
gi|92114149|ref|YP_574077.1| External link c8 SF No hits
  c8 PF
gi|160897678|ref|YP_001563260.1| External link 7d SF No hits
  7d PF
gi|186477724|ref|YP_001859194.1| External link 90 SF No hits
  90 PF
gi|30250331|ref|NP_842401.1| External link ne SF No hits
  ne PF
gi|108812129|ref|YP_647896.1| External link yn SF No hits
  yn PF
gi|91776294|ref|YP_546050.1| External link m7 SF No hits
  m7 PF
gi|115350221|ref|YP_772060.1| External link 0u SF No hits
  0u PF
gi|32490780|ref|NP_871034.1| External link wb SF No hits
  wb PF
gi|91211115|ref|YP_541101.1| External link e2 SF No hits
  e2 PF
gi|157371228|ref|YP_001479217.1| External link 7e SF No hits
  7e PF
gi|85058000|ref|YP_453702.1| External link og SF No hits
  og PF
gi|124384551|ref|YP_001027660.1| External link 38 SF No hits
  38 PF
gi|121601592|ref|YP_994717.1| External link 1m SF No hits
  1m PF
gi|172059243|ref|YP_001806895.1| External link 85 SF No hits
  85 PF
gi|157161363|ref|YP_001458681.1| External link 72 SF No hits
  72 PF
gi|116694191|ref|YP_728402.1| External link 2j SF No hits
  2j PF
gi|170681713|ref|YP_001743351.1| External link 8k SF No hits
  8k PF
gi|39546332|ref|NP_460881.2| External link su SF No hits
Gene name: flhC  su PF
29879.m000110 External link rk SF No hits
  rk PF
gi|120610685|ref|YP_970363.1| External link 4t SF No hits
  4t PF
gi|162420724|ref|YP_001607212.1| External link 6m SF No hits
  6m PF
gi|62180501|ref|YP_216918.1| External link x6 SF No hits
  x6 PF
gi|16760873|ref|NP_456490.1| External link si SF No hits
  si PF
gi|124268055|ref|YP_001022059.1| External link 14 SF No hits
  14 PF