DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Firmicute transcriptional repressor of class III stress genes (CtsR).

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|147676615|ref|YP_001210830.1| External link 09 SF No hits
  09 PF
gi|163938086|ref|YP_001642970.1| External link 62 SF No hits
  62 PF
gi|169832647|ref|YP_001695553.1| External link 8e SF No hits
  8e PF
gi|88194283|ref|YP_499075.1| External link aq SF No hits
  aq PF
gi|153940349|ref|YP_001392867.1| External link 5c SF No hits
  5c PF
gi|15675835|ref|NP_270009.1| External link x2 SF No hits
  x2 PF
gi|172056109|ref|YP_001812569.1| External link 7r SF No hits
  7r PF
gi|170755622|ref|YP_001783154.1| External link 8f SF No hits
  8f PF
gi|116495962|ref|YP_807696.1| External link 1o SF No hits
  1o PF
gi|50915109|ref|YP_061081.1| External link sp SF No hits
  sp PF
gi|118443129|ref|YP_877168.1| External link 12 SF No hits
  12 PF
gi|182685133|ref|YP_001836880.1| External link 86 SF No hits
  86 PF
gi|15896440|ref|NP_349789.1| External link ca SF No hits
  ca PF
gi|16799338|ref|NP_469606.1| External link li SF No hits
  li PF
gi|18311426|ref|NP_563360.1| External link cu SF No hits
  cu PF
gi|118475849|ref|YP_893000.1| External link 31 SF No hits
  31 PF
gi|161508761|ref|YP_001574420.1| External link 6o SF No hits
  6o PF
gi|57651399|ref|YP_185455.1| External link x8 SF No hits
  x8 PF
gi|148266981|ref|YP_001245924.1| External link 2c SF No hits
  2c PF
gi|153952831|ref|YP_001393596.1| External link 16 SF No hits
  16 PF
gi|15612663|ref|NP_240966.1| External link bh SF No hits
  bh PF
gi|153933599|ref|YP_001385829.1| External link 3t SF No hits
  3t PF
gi|146319630|ref|YP_001199342.1| External link 4r SF No hits
  4r PF
gi|94995254|ref|YP_603352.1| External link tg SF No hits
  tg PF
gi|51894271|ref|YP_076962.1| External link sb SF No hits
  sb PF
gi|25011909|ref|NP_736304.1| External link s5 SF No hits
  s5 PF
gi|169830068|ref|YP_001700226.1| External link 7z SF No hits
  7z PF
gi|56418610|ref|YP_145928.1| External link gk SF No hits
  gk PF
gi|19746950|ref|NP_608086.1| External link sx SF No hits
  sx PF
gi|55822066|ref|YP_140507.1| External link x1 SF No hits
  x1 PF
gi|78044917|ref|YP_361156.1| External link c9 SF No hits
  c9 PF
gi|49482751|ref|YP_039975.1| External link a0 SF No hits
  a0 PF
gi|49183112|ref|YP_026364.1| External link b0 SF No hits
  b0 PF
gi|138893754|ref|YP_001124207.1| External link 1u SF No hits
  1u PF
gi|82750229|ref|YP_415970.1| External link sk SF No hits
  sk PF
gi|139474524|ref|YP_001129240.1| External link 4z SF No hits
  4z PF
gi|57866093|ref|YP_187758.1| External link ep SF No hits
  ep PF
gi|52145137|ref|YP_081690.1| External link x5 SF No hits
  x5 PF
gi|146297368|ref|YP_001181139.1| External link 1q SF No hits
  1q PF
gi|116871613|ref|YP_848394.1| External link 2g SF No hits
  2g PF
gi|134298055|ref|YP_001111551.1| External link 0c SF No hits
  0c PF
gi|116516436|ref|YP_817408.1| External link 47 SF No hits
  47 PF
gi|16802275|ref|NP_463760.1| External link lm SF No hits
  lm PF
gi|15902002|ref|NP_346606.1| External link sr SF No hits
  sr PF
gi|52078578|ref|YP_077369.1| External link lf SF No hits
  lf PF
gi|15926199|ref|NP_373732.1| External link s2 SF No hits
  s2 PF
gi|148381454|ref|YP_001255995.1| External link 0i SF No hits
  0i PF
gi|94989404|ref|YP_597505.1| External link pk SF No hits
  pk PF
gi|125718982|ref|YP_001036115.1| External link 5b SF No hits
  5b PF
gi|156978850|ref|YP_001441109.1| External link 71 SF No hits
  71 PF