DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: CodY GAF-like domain.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|170759266|ref|YP_001787748.1| External link 8s SF
  8s PF
gi|153939169|ref|YP_001391734.1| External link 5c SF
  5c PF
gi|148380394|ref|YP_001254935.1| External link 0i SF
  0i PF
gi|18310683|ref|NP_562617.1| External link cu SF
  cu PF
gi|153937667|ref|YP_001388128.1| External link 2u SF
  2u PF
gi|170755234|ref|YP_001781979.1| External link 8f SF
  8f PF
gi|110801201|ref|YP_696388.1| External link 2f SF
  2f PF
gi|167630284|ref|YP_001680783.1| External link 8j SF
  8j PF
gi|15895062|ref|NP_348411.1| External link ca SF
  ca PF
gi|134299826|ref|YP_001113322.1| External link 0c SF
  0c PF
gi|110801731|ref|YP_698988.1| External link 5n SF
  5n PF
gi|153931825|ref|YP_001384611.1| External link 3t SF
  3t PF
gi|83589879|ref|YP_429888.1| External link m8 SF
  m8 PF
gi|172057892|ref|YP_001814352.1| External link 7r SF
  7r PF
gi|146320188|ref|YP_001199899.1| External link 2h SF
  2h PF
gi|169827116|ref|YP_001697274.1| External link 7z SF
  7z PF
gi|116510993|ref|YP_808209.1| External link 4o SF
  4o PF
gi|71911325|ref|YP_282875.1| External link zp SF
  zp PF
gi|76786992|ref|YP_330289.1| External link a9 SF
  a9 PF
gi|15901426|ref|NP_346030.1| External link sr SF
  sr PF
gi|94989143|ref|YP_597244.1| External link pk SF
  pk PF
gi|125717426|ref|YP_001034559.1| External link 5b SF
  5b PF
gi|116628324|ref|YP_820943.1| External link 4w SF
  4w PF
gi|24380188|ref|NP_722143.1| External link s6 SF
  s6 PF
gi|22537815|ref|NP_688666.1| External link s4 SF
  s4 PF
gi|15675618|ref|NP_269792.1| External link x2 SF
  x2 PF
gi|21911080|ref|NP_665348.1| External link s7 SF
  s7 PF
gi|139473210|ref|YP_001127925.1| External link 4z SF
  4z PF
gi|28895234|ref|NP_801584.1| External link s8 SF
  s8 PF
gi|25011759|ref|NP_736154.1| External link s5 SF
  s5 PF
gi|71904163|ref|YP_280966.1| External link zy SF
  zy PF
gi|55823539|ref|YP_141980.1| External link x1 SF
  x1 PF
gi|182684537|ref|YP_001836284.1| External link 86 SF
  86 PF
gi|19746726|ref|NP_607862.1| External link sx SF
  sx PF
gi|116515749|ref|YP_816871.1| External link 47 SF
  47 PF
gi|194397588|ref|YP_002038214.1| External link 8z SF
  8z PF
gi|55821611|ref|YP_140053.1| External link sd SF
  sd PF
gi|157149713|ref|YP_001449747.1| External link 6s SF
  6s PF
gi|29376199|ref|NP_815353.1| External link ef SF
  ef PF
gi|94991089|ref|YP_599189.1| External link ts SF
  ts PF
gi|169832460|ref|YP_001694987.1| External link 8e SF
  8e PF
gi|146318005|ref|YP_001197717.1| External link 4r SF
  4r PF
gi|94994968|ref|YP_603066.1| External link tg SF
  tg PF
gi|50914851|ref|YP_060823.1| External link sp SF
  sp PF
gi|125623050|ref|YP_001031533.1| External link 39 SF
  39 PF
gi|15903482|ref|NP_359032.1| External link st SF
  st PF
gi|94993036|ref|YP_601135.1| External link pp SF
  pp PF
gi|82750856|ref|YP_416597.1| External link sk SF No hits
  sk PF
gi|49186678|ref|YP_029930.1| External link b0 SF No hits
  b0 PF
gi|73662822|ref|YP_301603.1| External link zt SF No hits
  zt PF