DBD: Transcription factor prediction database

Release 2.0
Sequence ID search:
Binding category: DBD. Domain search: Competence protein CoiA-like family.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.

Details Genome DB Domain architecture
gi|157691863|ref|YP_001486325.1| External link 6f SF No hits
  6f PF
gi|182683923|ref|YP_001835670.1| External link 86 SF No hits
  86 PF
gi|16078218|ref|NP_389035.1| External link bs SF No hits
Gene name: yjbF  bs PF
gi|50914458|ref|YP_060430.1| External link sp SF No hits
  sp PF
gi|125717599|ref|YP_001034732.1| External link 5b SF No hits
  5b PF
gi|15902925|ref|NP_358475.1| External link st SF No hits
  st PF
gi|163939094|ref|YP_001643978.1| External link 62 SF No hits
  62 PF
gi|57866542|ref|YP_188170.1| External link ep SF No hits
  ep PF
gi|52785017|ref|YP_090846.1| External link lc SF No hits
  lc PF
gi|49184133|ref|YP_027385.1| External link b0 SF No hits
  b0 PF
gi|70726959|ref|YP_253873.1| External link zh SF No hits
  zh PF
gi|116629985|ref|YP_815157.1| External link 13 SF No hits
  13 PF
gi|56964291|ref|YP_176022.1| External link x4 SF No hits
  x4 PF
gi|87160302|ref|YP_493600.1| External link a2 SF No hits
  a2 PF
gi|21910599|ref|NP_664867.1| External link s7 SF No hits
  s7 PF
gi|116492966|ref|YP_804701.1| External link 0d SF No hits
  0d PF
gi|90961374|ref|YP_535290.1| External link lv SF No hits
  lv PF
gi|138894373|ref|YP_001124826.1| External link 1u SF No hits
  1u PF
gi|116512583|ref|YP_811490.1| External link 4o SF No hits
  4o PF
gi|52144138|ref|YP_082690.1| External link x5 SF No hits
  x5 PF
gi|55820536|ref|YP_138978.1| External link sd SF No hits
  sd PF
gi|94990716|ref|YP_598816.1| External link ts SF No hits
  ts PF
gi|161507174|ref|YP_001577128.1| External link 79 SF No hits
  79 PF
gi|42780387|ref|NP_977634.1| External link bx SF No hits
  bx PF
gi|116491178|ref|YP_810722.1| External link 4m SF No hits
  4m PF
gi|153003172|ref|YP_001377497.1| External link 55 SF No hits
  55 PF
gi|29377157|ref|NP_816311.1| External link ef SF No hits
  ef PF
gi|88194693|ref|YP_499489.1| External link aq SF No hits
  aq PF
gi|49485775|ref|YP_042996.1| External link ar SF No hits
  ar PF
gi|55822427|ref|YP_140868.1| External link x1 SF No hits
  x1 PF
gi|56419356|ref|YP_146674.1| External link gk SF No hits
  gk PF
gi|30261303|ref|NP_843680.1| External link ba SF No hits
  ba PF
gi|146318898|ref|YP_001198610.1| External link 4r SF No hits
  4r PF
gi|151221081|ref|YP_001331903.1| External link 5p SF No hits
  5p PF
gi|94988814|ref|YP_596915.1| External link pk SF No hits
  pk PF
gi|191637790|ref|YP_001986956.1| External link 95 SF No hits
  95 PF
gi|116627346|ref|YP_819965.1| External link 4w SF No hits
  4w PF
gi|16801357|ref|NP_471625.1| External link li SF No hits
  li PF
gi|156979325|ref|YP_001441584.1| External link 71 SF No hits
  71 PF
gi|169834084|ref|YP_001694423.1| External link 8e SF No hits
  8e PF
gi|148543804|ref|YP_001271174.1| External link 49 SF No hits
  49 PF
gi|116494406|ref|YP_806140.1| External link 1o SF No hits
  1o PF
gi|15673710|ref|NP_267884.1| External link ll SF No hits
  ll PF
gi|73663095|ref|YP_301876.1| External link zt SF No hits
  zt PF
gi|146321107|ref|YP_001200818.1| External link 2h SF No hits
  2h PF
gi|152974720|ref|YP_001374237.1| External link 0w SF No hits
  0w PF
gi|15675318|ref|NP_269492.1| External link x2 SF No hits
  x2 PF
gi|28378824|ref|NP_785716.1| External link lb SF No hits
  lb PF
gi|58336968|ref|YP_193553.1| External link lt SF No hits
  lt PF
gi|15900855|ref|NP_345459.1| External link sr SF No hits
  sr PF