DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: Transcriptional activator RinB.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


Details Genome DB Domain architecture
gi|15923872|ref|NP_371406.1| External link sa SF No hits
  sa PF
gi|57651288|ref|YP_185253.1| External link x8 SF No hits
  x8 PF
gi|88195737|ref|YP_500546.1| External link aq SF No hits
  aq PF
gi|88195876|ref|YP_500687.1| External link aq SF No hits
  aq PF
gi|49483705|ref|YP_040929.1| External link a0 SF No hits
  a0 PF
gi|57634643|ref|NP_372495.2| External link sa SF No hits
  sa PF
gi|148267317|ref|YP_001246260.1| External link 2c SF No hits
  2c PF
gi|87160353|ref|YP_494597.1| External link a2 SF No hits
  a2 PF
gi|88195262|ref|YP_500065.1| External link aq SF No hits
  aq PF
gi|15927547|ref|NP_375080.1| External link s2 SF No hits
  s2 PF
gi|21283645|ref|NP_646733.1| External link s1 SF No hits
  s1 PF
gi|156979208|ref|YP_001441467.1| External link 71 SF No hits
  71 PF
gi|150393369|ref|YP_001316044.1| External link 1i SF No hits
  1i PF
gi|161510195|ref|YP_001575854.1| External link 6o SF No hits
  6o PF
gi|21283140|ref|NP_646228.1| External link s1 SF No hits
  s1 PF
gi|148267485|ref|YP_001246428.1| External link 2c SF No hits
  2c PF
gi|161509690|ref|YP_001575349.1| External link 6o SF No hits
  6o PF
gi|150392820|ref|YP_001315495.1| External link 1i SF No hits
  1i PF
gi|156980288|ref|YP_001442547.1| External link 71 SF No hits
  71 PF
gi|49484215|ref|YP_041439.1| External link a0 SF No hits
  a0 PF
gi|148268445|ref|YP_001247388.1| External link 2c SF No hits
  2c PF
gi|148266776|ref|YP_001245719.1| External link 2c SF No hits
  2c PF
gi|49485828|ref|YP_043049.1| External link ar SF No hits
  ar PF
gi|150394507|ref|YP_001317182.1| External link 1i SF No hits
  1i PF
gi|150393538|ref|YP_001316213.1| External link 1i SF No hits
  1i PF
gi|87159913|ref|YP_494109.1| External link a2 SF No hits
  a2 PF
gi|82751450|ref|YP_417191.1| External link sk SF No hits
  sk PF
gi|49486792|ref|YP_044013.1| External link ar SF No hits
  ar PF