DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: ComK protein.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|169826760|ref|YP_001696918.1| External link 7z SF No hits
  7z PF
gi|87162400|ref|YP_493626.1| External link a2 SF No hits
  a2 PF
gi|52144194|ref|YP_082636.1| External link x5 SF No hits
  x5 PF
gi|151221107|ref|YP_001331929.1| External link 5p SF No hits
  5p PF
gi|156979350|ref|YP_001441609.1| External link 71 SF No hits
  71 PF
gi|57650217|ref|YP_185897.1| External link x8 SF No hits
  x8 PF
gi|148267518|ref|YP_001246461.1| External link 2c SF No hits
  2c PF
gi|46908503|ref|YP_014892.1| External link la SF No hits
  la PF
gi|88194718|ref|YP_499514.1| External link aq SF No hits
  aq PF
gi|15924016|ref|NP_371550.1| External link sa SF No hits
  sa PF
gi|49184077|ref|YP_027329.1| External link b0 SF No hits
  b0 PF
gi|16801434|ref|NP_471702.1| External link li SF No hits
  li PF
gi|49478928|ref|YP_039240.1| External link ko SF No hits
  ko PF
gi|49483189|ref|YP_040413.1| External link a0 SF No hits
  a0 PF
gi|154685494|ref|YP_001420655.1| External link 2o SF No hits
  2o PF
gi|82750637|ref|YP_416378.1| External link sk SF No hits
  sk PF
gi|172058436|ref|YP_001814896.1| External link 7r SF No hits
  7r PF
gi|47526407|ref|YP_017756.1| External link b2 SF No hits
  b2 PF
gi|116873701|ref|YP_850482.1| External link 2g SF No hits
  2g PF
gi|73663064|ref|YP_301845.1| External link zt SF No hits
  zt PF
gi|15926613|ref|NP_374146.1| External link s2 SF No hits
  s2 PF
gi|42784414|ref|NP_981661.1| External link bx SF No hits
  bx PF
gi|23100786|ref|NP_694253.1| External link oi SF No hits
  oi PF
gi|157691760|ref|YP_001486222.1| External link 6f SF No hits
  6f PF
gi|150393574|ref|YP_001316249.1| External link 1i SF No hits
  1i PF
gi|118480289|ref|YP_897440.1| External link 31 SF No hits
  31 PF
gi|163939031|ref|YP_001643915.1| External link 62 SF No hits
  62 PF
gi|49485864|ref|YP_043085.1| External link ar SF No hits
  ar PF
gi|30019289|ref|NP_830920.1| External link bc SF No hits
  bc PF
gi|138894259|ref|YP_001124712.1| External link 1u SF No hits
  1u PF
gi|52140317|ref|YP_086516.1| External link x5 SF No hits
  x5 PF
gi|27467649|ref|NP_764286.1| External link s3 SF No hits
  s3 PF
gi|21282635|ref|NP_645723.1| External link s1 SF No hits
  s1 PF
gi|30261245|ref|NP_843622.1| External link ba SF No hits
  ba PF
gi|169826758|ref|YP_001696916.1| External link 7z SF No hits
  7z PF
gi|52079526|ref|YP_078317.1| External link lf SF No hits
  lf PF
gi|16801489|ref|NP_471757.1| External link li SF No hits
  li PF
gi|56419213|ref|YP_146531.1| External link gk SF No hits
  gk PF
gi|42780311|ref|NP_977558.1| External link bx SF No hits
  bx PF
gi|118476722|ref|YP_893873.1| External link 31 SF No hits
  31 PF
gi|16804309|ref|NP_465794.1| External link lm SF No hits
  lm PF
gi|52784891|ref|YP_090720.1| External link lc SF No hits
  lc PF
gi|152974669|ref|YP_001374186.1| External link 0w SF No hits
  0w PF
gi|23098632|ref|NP_692098.1| External link oi SF No hits
  oi PF
gi|57866610|ref|YP_188205.1| External link ep SF No hits
  ep PF
gi|161509223|ref|YP_001574882.1| External link 6o SF No hits
  6o PF
gi|16078106|ref|NP_388923.1| External link bs SF No hits
Gene name: comK  bs PF
gi|49188087|ref|YP_031340.1| External link b0 SF No hits
  b0 PF
gi|70726927|ref|YP_253841.1| External link zh SF No hits
  zh PF
gi|172056763|ref|YP_001813223.1| External link 7r SF No hits
  7r PF