DBD: Transcription factor prediction database

Release 2.0
www.transcriptionfactor.org
Sequence ID search:
Binding category: DBD. Domain search: AraC-type transcriptional regulator N-terminus.

Each predicted transcription factor is displayed with its SUPERFAMILY (SF) as well as PFAM (PF) architecture.
The domain architectures are represented as colored rectangles and oblongs on a black line corresponding to the polypeptide chain.
The oblongs represent DNA-binding domains, and the rectangles represent domains with other functions.
The numbers inside the SF rectangles represent the SF database identifier for that protein superfamily, and are linked to a description.
The PFAM identifiers inside the boxes are also linked to descriptions of the family.
All the domains belonging to one family have the same colored rectangle.
Colors are reused for different families, so that two different families can be represented by the same color.

The full repertoire of transcription factors may be distributed across several pages of results.
These can be accessed by clicking on the individual page numbers, or downloading the entire set of results from the Download section.


 
Details Genome DB Domain architecture
gi|17547310|ref|NP_520712.1| External link rs SF
  rs PF
gi|107028568|ref|YP_625663.1| External link b6 SF
  b6 PF
gi|30064364|ref|NP_838535.1| External link fs SF
  fs PF
gi|183219554|ref|YP_001837550.1| External link 83 SF
  83 PF
gi|62181677|ref|YP_218094.1| External link x6 SF
  x6 PF
gi|146283240|ref|YP_001173393.1| External link 2e SF
  2e PF
gi|78067923|ref|YP_370692.1| External link bk SF
  bk PF
gi|77359528|ref|YP_339103.1| External link ha SF
  ha PF
gi|119775844|ref|YP_928584.1| External link 2p SF
  2p PF
gi|78060248|ref|YP_366823.1| External link bk SF
  bk PF
gi|167646361|ref|YP_001684024.1| External link 7o SF
  7o PF
gi|172062940|ref|YP_001810591.1| External link 85 SF
  85 PF
gi|107028578|ref|YP_625673.1| External link b6 SF
  b6 PF
27859.m000066 External link rk SF
  rk PF
gi|153010927|ref|YP_001372141.1| External link 40 SF
  40 PF
gi|50084983|ref|YP_046493.1| External link ab SF
  ab PF
gi|76811172|ref|YP_331787.1| External link bz SF
  bz PF
gi|16761939|ref|NP_457556.1| External link ty SF
  ty PF
gi|162148312|ref|YP_001602773.1| External link 7c SF
  7c PF
gi|114561262|ref|YP_748775.1| External link 3w SF
  3w PF
gi|152998470|ref|YP_001343305.1| External link 0z SF
  0z PF
gi|170735164|ref|YP_001774278.1| External link 7j SF
  7j PF
gi|91778355|ref|YP_553563.1| External link b4 SF
  b4 PF
gi|116251110|ref|YP_766948.1| External link 17 SF
  17 PF
gi|124385658|ref|YP_001028150.1| External link 38 SF
  38 PF
gi|152995971|ref|YP_001340806.1| External link 0z SF
  0z PF
27423.m000048 External link rk SF
  rk PF
gi|104783321|ref|YP_609819.1| External link pq SF
  pq PF
gi|167035410|ref|YP_001670641.1| External link 7g SF
  7g PF
gi|119383813|ref|YP_914869.1| External link 27 SF
  27 PF
gi|116049339|ref|YP_791858.1| External link 2t SF
  2t PF
gi|45442756|ref|NP_994295.1| External link ye SF
  ye PF
gi|33596009|ref|NP_883652.1| External link bp SF
  bp PF
gi|152969906|ref|YP_001335015.1| External link 2k SF
  2k PF
gi|109898573|ref|YP_661828.1| External link px SF
  px PF
jgi|Batde5|92940|GP3.084990 External link b9 SF
  b9 PF
gi|77360529|ref|YP_340104.1| External link ha SF
  ha PF
gi|53724368|ref|YP_104716.1| External link bi SF
  bi PF
gi|170735173|ref|YP_001774287.1| External link 7j SF
  7j PF
gi|28901568|ref|NP_801223.1| External link vp SF
  vp PF
gi|33593140|ref|NP_880784.1| External link be SF
  be PF
gi|116692929|ref|YP_838462.1| External link 5l SF
  5l PF
gi|187251287|ref|YP_001875769.1| External link 94 SF
  94 PF
30427.m000029 External link rk SF
  rk PF
gi|77460686|ref|YP_350193.1| External link pn SF
  pn PF
gi|146308234|ref|YP_001188699.1| External link 4y SF
  4y PF
gi|26988129|ref|NP_743554.1| External link ps SF
  ps PF
gi|15890109|ref|NP_355781.1| External link au SF
  au PF
gi|170683787|ref|YP_001745274.1| External link 9t SF
  9t PF
gi|116686568|ref|YP_839815.1| External link 5l SF
  5l PF